Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
AP1S3Q96PC3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.17■□□□□ 0.02
AP1S3Q96PC3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.17■□□□□ 0.02
AP1S3Q96PC3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
AP1S3Q96PC3 AL138724.1-201ENST00000606771 1088 ntBASIC15.17■□□□□ 0.02
AP1S3Q96PC3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP1S3Q96PC3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.17■□□□□ 0.02
AP1S3Q96PC3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP1S3Q96PC3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.17■□□□□ 0.02
AP1S3Q96PC3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP1S3Q96PC3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP1S3Q96PC3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP1S3Q96PC3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP1S3Q96PC3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP1S3Q96PC3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
AP1S3Q96PC3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP1S3Q96PC3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 AC073314.1-201ENST00000568729 2216 ntBASIC15.16■□□□□ 0.02
AP1S3Q96PC3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S3Q96PC3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 MIR3621-201ENST00000580529 85 ntBASIC15.15■□□□□ 0.02
AP1S3Q96PC3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S3Q96PC3 PLK5-205ENST00000642079 1969 ntBASIC15.15■□□□□ 0.02
AP1S3Q96PC3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.14■□□□□ 0.01
AP1S3Q96PC3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 DUX4L19-201ENST00000557448 1267 ntBASIC15.14■□□□□ 0.01
AP1S3Q96PC3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 SYT6-210ENST00000641643 1587 ntBASIC15.14■□□□□ 0.01
AP1S3Q96PC3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.14■□□□□ 0.01
AP1S3Q96PC3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms