Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CASD1Q96PB1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CASD1Q96PB1 AL355355.2-201ENST00000442321 338 ntBASIC21.6■■□□□ 1.05
CASD1Q96PB1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CASD1Q96PB1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CASD1Q96PB1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CASD1Q96PB1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CASD1Q96PB1 AC012676.1-201ENST00000574705 1949 ntBASIC21.6■■□□□ 1.05
CASD1Q96PB1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CASD1Q96PB1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.6■■□□□ 1.05
CASD1Q96PB1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CASD1Q96PB1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CASD1Q96PB1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CASD1Q96PB1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
CASD1Q96PB1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
CASD1Q96PB1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CASD1Q96PB1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.59■■□□□ 1.05
CASD1Q96PB1 HLA-G-202ENST00000376815 851 ntBASIC21.59■■□□□ 1.05
CASD1Q96PB1 HLA-G-203ENST00000376818 1127 ntBASIC21.59■■□□□ 1.05
CASD1Q96PB1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CASD1Q96PB1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.59■■□□□ 1.05
CASD1Q96PB1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.59■■□□□ 1.05
CASD1Q96PB1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.59■■□□□ 1.05
CASD1Q96PB1 AC010331.1-201ENST00000611423 582 ntBASIC21.59■■□□□ 1.05
CASD1Q96PB1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.59■■□□□ 1.05
CASD1Q96PB1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.59■■□□□ 1.05
CASD1Q96PB1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CASD1Q96PB1 AC133561.1-201ENST00000568600 2415 ntBASIC21.59■■□□□ 1.05
CASD1Q96PB1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CASD1Q96PB1 AL121603.2-201ENST00000557373 2117 ntBASIC21.59■■□□□ 1.05
CASD1Q96PB1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CASD1Q96PB1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.59■■□□□ 1.05
CASD1Q96PB1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CASD1Q96PB1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CASD1Q96PB1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CASD1Q96PB1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.58■■□□□ 1.05
CASD1Q96PB1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CASD1Q96PB1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CASD1Q96PB1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CASD1Q96PB1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
CASD1Q96PB1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CASD1Q96PB1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CASD1Q96PB1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.58■■□□□ 1.05
CASD1Q96PB1 AC073195.1-201ENST00000607241 877 ntBASIC21.58■■□□□ 1.05
CASD1Q96PB1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.58■■□□□ 1.04
CASD1Q96PB1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CASD1Q96PB1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CASD1Q96PB1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CASD1Q96PB1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CASD1Q96PB1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CASD1Q96PB1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CASD1Q96PB1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CASD1Q96PB1 FEM1AP4-201ENST00000443167 1987 ntBASIC21.57■■□□□ 1.04
CASD1Q96PB1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CASD1Q96PB1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CASD1Q96PB1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CASD1Q96PB1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CASD1Q96PB1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
CASD1Q96PB1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CASD1Q96PB1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.57■■□□□ 1.04
CASD1Q96PB1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CASD1Q96PB1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CASD1Q96PB1 AC004264.1-201ENST00000608354 794 ntBASIC21.57■■□□□ 1.04
CASD1Q96PB1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.57■■□□□ 1.04
CASD1Q96PB1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CASD1Q96PB1 PLK5-205ENST00000642079 1969 ntBASIC21.57■■□□□ 1.04
CASD1Q96PB1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CASD1Q96PB1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASD1Q96PB1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CASD1Q96PB1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.56■■□□□ 1.04
CASD1Q96PB1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CASD1Q96PB1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASD1Q96PB1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASD1Q96PB1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.56■■□□□ 1.04
CASD1Q96PB1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.56■■□□□ 1.04
CASD1Q96PB1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.56■■□□□ 1.04
CASD1Q96PB1 AL031963.3-201ENST00000606441 850 ntBASIC21.56■■□□□ 1.04
CASD1Q96PB1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.56■■□□□ 1.04
CASD1Q96PB1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.56■■□□□ 1.04
CASD1Q96PB1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASD1Q96PB1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CASD1Q96PB1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.56■■□□□ 1.04
CASD1Q96PB1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
CASD1Q96PB1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CASD1Q96PB1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASD1Q96PB1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.56■■□□□ 1.04
CASD1Q96PB1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.55■■□□□ 1.04
CASD1Q96PB1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CASD1Q96PB1 KRT8P20-201ENST00000423953 1409 ntBASIC21.55■■□□□ 1.04
CASD1Q96PB1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.55■■□□□ 1.04
CASD1Q96PB1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
CASD1Q96PB1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CASD1Q96PB1 RCN1P1-201ENST00000400413 996 ntBASIC21.55■■□□□ 1.04
CASD1Q96PB1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.55■■□□□ 1.04
CASD1Q96PB1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.55■■□□□ 1.04
CASD1Q96PB1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.55■■□□□ 1.04
CASD1Q96PB1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.55■■□□□ 1.04
CASD1Q96PB1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CASD1Q96PB1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.55■■□□□ 1.04
CASD1Q96PB1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms