Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.76■■□□□ 1.07
SNX27Q96L92 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.76■■□□□ 1.07
SNX27Q96L92 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.76■■□□□ 1.07
SNX27Q96L92 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.76■■□□□ 1.07
SNX27Q96L92 RN7SL471P-201ENST00000580476 299 ntBASIC21.76■■□□□ 1.07
SNX27Q96L92 AL137060.1-201ENST00000618151 2648 ntBASIC21.76■■□□□ 1.07
SNX27Q96L92 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.76■■□□□ 1.07
SNX27Q96L92 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SNX27Q96L92 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX27Q96L92 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX27Q96L92 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX27Q96L92 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.75■■□□□ 1.07
SNX27Q96L92 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.75■■□□□ 1.07
SNX27Q96L92 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.75■■□□□ 1.07
SNX27Q96L92 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.75■■□□□ 1.07
SNX27Q96L92 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.75■■□□□ 1.07
SNX27Q96L92 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX27Q96L92 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.75■■□□□ 1.07
SNX27Q96L92 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.75■■□□□ 1.07
SNX27Q96L92 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
SNX27Q96L92 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNX27Q96L92 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX27Q96L92 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SNX27Q96L92 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX27Q96L92 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.75■■□□□ 1.07
SNX27Q96L92 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SNX27Q96L92 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SNX27Q96L92 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX27Q96L92 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX27Q96L92 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.74■■□□□ 1.07
SNX27Q96L92 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.74■■□□□ 1.07
SNX27Q96L92 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX27Q96L92 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNX27Q96L92 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNX27Q96L92 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.74■■□□□ 1.07
SNX27Q96L92 AL359736.2-201ENST00000621992 437 ntBASIC21.74■■□□□ 1.07
SNX27Q96L92 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.74■■□□□ 1.07
SNX27Q96L92 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.74■■□□□ 1.07
SNX27Q96L92 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX27Q96L92 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.74■■□□□ 1.07
SNX27Q96L92 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX27Q96L92 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX27Q96L92 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNX27Q96L92 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SNX27Q96L92 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
SNX27Q96L92 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNX27Q96L92 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX27Q96L92 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.73■■□□□ 1.07
SNX27Q96L92 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX27Q96L92 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX27Q96L92 AC092720.2-201ENST00000602388 1665 ntBASIC21.73■■□□□ 1.07
SNX27Q96L92 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX27Q96L92 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SNX27Q96L92 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
SNX27Q96L92 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX27Q96L92 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
SNX27Q96L92 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.73■■□□□ 1.07
SNX27Q96L92 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SNX27Q96L92 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX27Q96L92 AC008550.1-201ENST00000511500 884 ntBASIC21.73■■□□□ 1.07
SNX27Q96L92 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.73■■□□□ 1.07
SNX27Q96L92 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX27Q96L92 AL031963.3-201ENST00000606441 850 ntBASIC21.73■■□□□ 1.07
SNX27Q96L92 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.73■■□□□ 1.07
SNX27Q96L92 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SNX27Q96L92 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX27Q96L92 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX27Q96L92 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX27Q96L92 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX27Q96L92 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX27Q96L92 DPP3P2-201ENST00000416030 1696 ntBASIC21.72■■□□□ 1.07
SNX27Q96L92 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SNX27Q96L92 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX27Q96L92 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.72■■□□□ 1.07
SNX27Q96L92 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX27Q96L92 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.72■■□□□ 1.07
SNX27Q96L92 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.72■■□□□ 1.07
SNX27Q96L92 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
SNX27Q96L92 C1QBPP2-201ENST00000528754 825 ntBASIC21.72■■□□□ 1.07
SNX27Q96L92 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX27Q96L92 MTDHP1-201ENST00000605323 784 ntBASIC21.72■■□□□ 1.07
SNX27Q96L92 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.72■■□□□ 1.07
SNX27Q96L92 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX27Q96L92 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX27Q96L92 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX27Q96L92 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SNX27Q96L92 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX27Q96L92 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX27Q96L92 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX27Q96L92 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNX27Q96L92 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SNX27Q96L92 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.71■■□□□ 1.07
SNX27Q96L92 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX27Q96L92 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNX27Q96L92 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
SNX27Q96L92 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNX27Q96L92 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.71■■□□□ 1.07
SNX27Q96L92 RPPH1-201ENST00000516869 333 ntBASIC21.71■■□□□ 1.07
SNX27Q96L92 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.71■■□□□ 1.07
SNX27Q96L92 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms