Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.2■□□□□ 0.98
SMARCD1Q96GM5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.2■□□□□ 0.98
SMARCD1Q96GM5 AC120498.8-201ENST00000614275 531 ntBASIC21.2■□□□□ 0.98
SMARCD1Q96GM5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCD1Q96GM5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SMARCD1Q96GM5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCD1Q96GM5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCD1Q96GM5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.2■□□□□ 0.98
SMARCD1Q96GM5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCD1Q96GM5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCD1Q96GM5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SMARCD1Q96GM5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 PRORSD1P-201ENST00000295112 541 ntBASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCD1Q96GM5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 AC069544.1-201ENST00000609399 999 ntBASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 KRT8P17-201ENST00000453110 1448 ntBASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCD1Q96GM5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SMARCD1Q96GM5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMARCD1Q96GM5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMARCD1Q96GM5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SMARCD1Q96GM5 AC020907.5-201ENST00000624372 1936 ntBASIC21.16■□□□□ 0.98
SMARCD1Q96GM5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMARCD1Q96GM5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SMARCD1Q96GM5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.16■□□□□ 0.98
SMARCD1Q96GM5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.16■□□□□ 0.98
SMARCD1Q96GM5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.16■□□□□ 0.98
SMARCD1Q96GM5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.16■□□□□ 0.98
SMARCD1Q96GM5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMARCD1Q96GM5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMARCD1Q96GM5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SMARCD1Q96GM5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMARCD1Q96GM5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 AC233263.1-201ENST00000578059 224 ntBASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCD1Q96GM5 AC073314.1-201ENST00000568729 2216 ntBASIC21.14■□□□□ 0.98
SMARCD1Q96GM5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMARCD1Q96GM5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.14■□□□□ 0.98
SMARCD1Q96GM5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SMARCD1Q96GM5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms