Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 HLA-G-203ENST00000376818 1127 ntBASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 AC120498.8-201ENST00000614275 531 ntBASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 POM121L13P-201ENST00000422362 380 ntBASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 GABARAPL3-202ENST00000624044 1851 ntBASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC3Q96DC8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
ECHDC3Q96DC8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ECHDC3Q96DC8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ECHDC3Q96DC8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 AC006058.3-201ENST00000606217 1069 ntBASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 SMG8-203ENST00000578922 2178 ntBASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
ECHDC3Q96DC8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 AC128676.1-201ENST00000454392 318 ntBASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC3Q96DC8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 TMEM191A-211ENST00000637163 1067 ntBASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 AC073648.6-201ENST00000641589 218 ntBASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ECHDC3Q96DC8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms