Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 AC116562.4-201ENST00000641316 2276 ntBASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 SLC7A5P1-201ENST00000568957 537 ntBASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 AC087289.5-201ENST00000586076 3175 ntBASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 AL691432.2-201ENST00000607222 2038 ntBASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 CDV3P1-201ENST00000471403 739 ntBASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 KRT18P14-201ENST00000534205 1250 ntBASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 AC019069.1-201ENST00000610008 1333 ntBASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
TUBGCP3Q96CW5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TUBGCP3Q96CW5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TUBGCP3Q96CW5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms