Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXRED1Q96CU9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXRED1Q96CU9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 DUX4L2-201ENST00000561772 1275 ntBASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 AC087623.3-201ENST00000607047 1098 ntBASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 DUX4L6-201ENST00000626483 1275 ntBASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 DUX4L1-201ENST00000627662 1275 ntBASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 DUX4L8-201ENST00000629013 1275 ntBASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 DUX4L3-201ENST00000630187 1275 ntBASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 DUX4L7-201ENST00000630678 1275 ntBASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 DUX4L5-201ENST00000630834 1275 ntBASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 AC116562.4-201ENST00000641316 2276 ntBASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXRED1Q96CU9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 TERF1P2-201ENST00000583350 1212 ntBASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 FAM21FP-204ENST00000608637 956 ntBASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 DPP3P2-201ENST00000416030 1696 ntBASIC17.42■□□□□ 0.38
FOXRED1Q96CU9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 AC125437.2-201ENST00000625180 2167 ntBASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 CCDC92B-201ENST00000575506 885 ntBASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.41■□□□□ 0.38
FOXRED1Q96CU9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms