Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP9XQ93008 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.67■□□□□ 0.42
USP9XQ93008 AL138966.2-201ENST00000621997 464 ntBASIC17.67■□□□□ 0.42
USP9XQ93008 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP9XQ93008 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP9XQ93008 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP9XQ93008 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.67■□□□□ 0.42
USP9XQ93008 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP9XQ93008 HMGA1P5-201ENST00000412453 271 ntBASIC17.67■□□□□ 0.42
USP9XQ93008 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.67■□□□□ 0.42
USP9XQ93008 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.67■□□□□ 0.42
USP9XQ93008 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.67■□□□□ 0.42
USP9XQ93008 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
USP9XQ93008 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.67■□□□□ 0.42
USP9XQ93008 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.67■□□□□ 0.42
USP9XQ93008 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.66■□□□□ 0.42
USP9XQ93008 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.66■□□□□ 0.42
USP9XQ93008 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP9XQ93008 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP9XQ93008 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP9XQ93008 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
USP9XQ93008 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP9XQ93008 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.66■□□□□ 0.42
USP9XQ93008 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
USP9XQ93008 AC246785.2-201ENST00000432512 513 ntBASIC17.66■□□□□ 0.42
USP9XQ93008 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
USP9XQ93008 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.66■□□□□ 0.42
USP9XQ93008 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.66■□□□□ 0.42
USP9XQ93008 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP9XQ93008 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP9XQ93008 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP9XQ93008 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.66■□□□□ 0.42
USP9XQ93008 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.66■□□□□ 0.42
USP9XQ93008 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.66■□□□□ 0.42
USP9XQ93008 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.66■□□□□ 0.42
USP9XQ93008 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.66■□□□□ 0.42
USP9XQ93008 TSPY5P-201ENST00000426936 936 ntBASIC17.66■□□□□ 0.42
USP9XQ93008 PVRIG2P-201ENST00000435460 978 ntBASIC17.66■□□□□ 0.42
USP9XQ93008 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.66■□□□□ 0.42
USP9XQ93008 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.66■□□□□ 0.42
USP9XQ93008 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.66■□□□□ 0.42
USP9XQ93008 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP9XQ93008 AL691432.3-201ENST00000621860 400 ntBASIC17.66■□□□□ 0.42
USP9XQ93008 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP9XQ93008 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP9XQ93008 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP9XQ93008 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.65■□□□□ 0.42
USP9XQ93008 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.65■□□□□ 0.42
USP9XQ93008 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP9XQ93008 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.65■□□□□ 0.42
USP9XQ93008 FAM86EP-206ENST00000510506 987 ntBASIC17.65■□□□□ 0.42
USP9XQ93008 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.65■□□□□ 0.42
USP9XQ93008 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP9XQ93008 DGCR10-201ENST00000609839 495 ntBASIC17.65■□□□□ 0.42
USP9XQ93008 AC130371.2-201ENST00000619443 611 ntBASIC17.65■□□□□ 0.42
USP9XQ93008 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
USP9XQ93008 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP9XQ93008 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP9XQ93008 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP9XQ93008 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
USP9XQ93008 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
USP9XQ93008 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USP9XQ93008 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP9XQ93008 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP9XQ93008 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.65■□□□□ 0.42
USP9XQ93008 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.65■□□□□ 0.42
USP9XQ93008 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.65■□□□□ 0.42
USP9XQ93008 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
USP9XQ93008 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP9XQ93008 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP9XQ93008 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP9XQ93008 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
USP9XQ93008 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.64■□□□□ 0.41
USP9XQ93008 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP9XQ93008 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
USP9XQ93008 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP9XQ93008 PCED1CP-201ENST00000419887 785 ntBASIC17.64■□□□□ 0.41
USP9XQ93008 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.64■□□□□ 0.41
USP9XQ93008 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.64■□□□□ 0.41
USP9XQ93008 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP9XQ93008 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP9XQ93008 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
USP9XQ93008 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
USP9XQ93008 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
USP9XQ93008 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.64■□□□□ 0.41
USP9XQ93008 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.64■□□□□ 0.41
USP9XQ93008 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.64■□□□□ 0.41
USP9XQ93008 AC011506.1-201ENST00000474329 610 ntBASIC17.64■□□□□ 0.41
USP9XQ93008 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.64■□□□□ 0.41
USP9XQ93008 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
USP9XQ93008 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.64■□□□□ 0.41
USP9XQ93008 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.64■□□□□ 0.41
USP9XQ93008 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.64■□□□□ 0.41
USP9XQ93008 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
USP9XQ93008 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP9XQ93008 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.63■□□□□ 0.41
USP9XQ93008 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP9XQ93008 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.63■□□□□ 0.41
USP9XQ93008 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP9XQ93008 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms