Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
SMARCC1Q92922 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
SMARCC1Q92922 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SMARCC1Q92922 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC25.88■■□□□ 1.73
SMARCC1Q92922 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.88■■□□□ 1.73
SMARCC1Q92922 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC25.88■■□□□ 1.73
SMARCC1Q92922 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMARCC1Q92922 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMARCC1Q92922 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMARCC1Q92922 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC25.88■■□□□ 1.73
SMARCC1Q92922 TMA16-209ENST00000513272 803 ntTSL 2 BASIC25.88■■□□□ 1.73
SMARCC1Q92922 RBM42-202ENST00000586618 771 ntTSL 3 BASIC25.88■■□□□ 1.73
SMARCC1Q92922 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.88■■□□□ 1.73
SMARCC1Q92922 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.88■■□□□ 1.73
SMARCC1Q92922 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SMARCC1Q92922 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC25.88■■□□□ 1.73
SMARCC1Q92922 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.88■■□□□ 1.73
SMARCC1Q92922 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCC1Q92922 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCC1Q92922 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.87■■□□□ 1.73
SMARCC1Q92922 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC25.87■■□□□ 1.73
SMARCC1Q92922 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCC1Q92922 CFL2-205ENST00000555765 632 ntTSL 2 BASIC25.87■■□□□ 1.73
SMARCC1Q92922 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
SMARCC1Q92922 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
SMARCC1Q92922 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
SMARCC1Q92922 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
SMARCC1Q92922 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCC1Q92922 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCC1Q92922 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC25.87■■□□□ 1.73
SMARCC1Q92922 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC25.87■■□□□ 1.73
SMARCC1Q92922 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC25.86■■□□□ 1.73
SMARCC1Q92922 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCC1Q92922 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCC1Q92922 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC25.86■■□□□ 1.73
SMARCC1Q92922 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
SMARCC1Q92922 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC25.86■■□□□ 1.73
SMARCC1Q92922 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCC1Q92922 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
SMARCC1Q92922 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC25.86■■□□□ 1.73
SMARCC1Q92922 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC25.86■■□□□ 1.73
SMARCC1Q92922 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCC1Q92922 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
SMARCC1Q92922 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCC1Q92922 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
SMARCC1Q92922 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCC1Q92922 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCC1Q92922 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.85■■□□□ 1.73
SMARCC1Q92922 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCC1Q92922 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCC1Q92922 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC25.85■■□□□ 1.73
SMARCC1Q92922 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.85■■□□□ 1.73
SMARCC1Q92922 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCC1Q92922 DUX4L26-201ENST00000489078 1255 ntBASIC25.85■■□□□ 1.73
SMARCC1Q92922 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC25.85■■□□□ 1.73
SMARCC1Q92922 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCC1Q92922 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCC1Q92922 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCC1Q92922 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.84■■□□□ 1.73
SMARCC1Q92922 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC1Q92922 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC1Q92922 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC1Q92922 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC1Q92922 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC1Q92922 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
SMARCC1Q92922 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.84■■□□□ 1.73
SMARCC1Q92922 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC25.84■■□□□ 1.73
SMARCC1Q92922 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC1Q92922 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC1Q92922 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC1Q92922 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC1Q92922 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC1Q92922 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC1Q92922 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.84■■□□□ 1.73
SMARCC1Q92922 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC1Q92922 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.84■■□□□ 1.73
SMARCC1Q92922 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC1Q92922 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC1Q92922 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.83■■□□□ 1.73
SMARCC1Q92922 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.83■■□□□ 1.73
SMARCC1Q92922 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMARCC1Q92922 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
SMARCC1Q92922 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMARCC1Q92922 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC25.83■■□□□ 1.73
SMARCC1Q92922 AC104076.2-201ENST00000448912 469 ntBASIC25.83■■□□□ 1.73
SMARCC1Q92922 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC25.83■■□□□ 1.73
SMARCC1Q92922 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC25.83■■□□□ 1.73
SMARCC1Q92922 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SMARCC1Q92922 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMARCC1Q92922 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SMARCC1Q92922 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SMARCC1Q92922 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.82■■□□□ 1.72
SMARCC1Q92922 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SMARCC1Q92922 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
SMARCC1Q92922 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC25.82■■□□□ 1.72
SMARCC1Q92922 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC25.82■■□□□ 1.72
SMARCC1Q92922 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC25.82■■□□□ 1.72
SMARCC1Q92922 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
SMARCC1Q92922 NTF6B-201ENST00000591913 560 ntBASIC25.82■■□□□ 1.72
SMARCC1Q92922 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms