Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
DEPDC1BQ8WUY9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.29■■□□□ 1
DEPDC1BQ8WUY9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
DEPDC1BQ8WUY9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DEPDC1BQ8WUY9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DEPDC1BQ8WUY9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
DEPDC1BQ8WUY9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
DEPDC1BQ8WUY9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.29■■□□□ 1
DEPDC1BQ8WUY9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.29■■□□□ 1
DEPDC1BQ8WUY9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 POM121L13P-201ENST00000422362 380 ntBASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 PLK5-205ENST00000642079 1969 ntBASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.28■■□□□ 1
DEPDC1BQ8WUY9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DEPDC1BQ8WUY9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DEPDC1BQ8WUY9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
DEPDC1BQ8WUY9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
DEPDC1BQ8WUY9 AL157384.1-201ENST00000445995 2473 ntBASIC21.27■■□□□ 1
DEPDC1BQ8WUY9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.27■■□□□ 1
DEPDC1BQ8WUY9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.27■■□□□ 1
DEPDC1BQ8WUY9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DEPDC1BQ8WUY9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
DEPDC1BQ8WUY9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.27■■□□□ 1
DEPDC1BQ8WUY9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.27■■□□□ 1
DEPDC1BQ8WUY9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
DEPDC1BQ8WUY9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
DEPDC1BQ8WUY9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.27■■□□□ 1
DEPDC1BQ8WUY9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
DEPDC1BQ8WUY9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 MIR4497-201ENST00000583208 89 ntBASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DEPDC1BQ8WUY9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 AC233263.1-201ENST00000578059 224 ntBASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DEPDC1BQ8WUY9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.24■□□□□ 0.99
DEPDC1BQ8WUY9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DEPDC1BQ8WUY9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.24■□□□□ 0.99
DEPDC1BQ8WUY9 SLC25A24-204ENST00000569674 2357 ntBASIC21.24■□□□□ 0.99
DEPDC1BQ8WUY9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DEPDC1BQ8WUY9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
DEPDC1BQ8WUY9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms