Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 AC104076.2-201ENST00000448912 469 ntBASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 AC004264.1-201ENST00000608354 794 ntBASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNIP1Q8TAD8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SNIP1Q8TAD8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.02■□□□□ 0.63
SNIP1Q8TAD8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SNIP1Q8TAD8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
SNIP1Q8TAD8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.02■□□□□ 0.63
SNIP1Q8TAD8 AL117328.2-201ENST00000624617 1940 ntBASIC19.02■□□□□ 0.63
SNIP1Q8TAD8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SNIP1Q8TAD8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNIP1Q8TAD8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNIP1Q8TAD8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNIP1Q8TAD8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNIP1Q8TAD8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNIP1Q8TAD8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.01■□□□□ 0.63
SNIP1Q8TAD8 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.01■□□□□ 0.63
SNIP1Q8TAD8 AC116562.2-201ENST00000507042 360 ntBASIC19.01■□□□□ 0.63
SNIP1Q8TAD8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.01■□□□□ 0.63
SNIP1Q8TAD8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNIP1Q8TAD8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNIP1Q8TAD8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.01■□□□□ 0.63
SNIP1Q8TAD8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SNIP1Q8TAD8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNIP1Q8TAD8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNIP1Q8TAD8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19■□□□□ 0.63
SNIP1Q8TAD8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNIP1Q8TAD8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19■□□□□ 0.63
SNIP1Q8TAD8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19■□□□□ 0.63
SNIP1Q8TAD8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SNIP1Q8TAD8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
SNIP1Q8TAD8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNIP1Q8TAD8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNIP1Q8TAD8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNIP1Q8TAD8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNIP1Q8TAD8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19■□□□□ 0.63
SNIP1Q8TAD8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19■□□□□ 0.63
SNIP1Q8TAD8 AL390955.1-201ENST00000428694 934 ntBASIC19■□□□□ 0.63
SNIP1Q8TAD8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19■□□□□ 0.63
SNIP1Q8TAD8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19■□□□□ 0.63
SNIP1Q8TAD8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19■□□□□ 0.63
SNIP1Q8TAD8 AL121906.2-201ENST00000621597 723 ntBASIC19■□□□□ 0.63
SNIP1Q8TAD8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19■□□□□ 0.63
SNIP1Q8TAD8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNIP1Q8TAD8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19■□□□□ 0.63
SNIP1Q8TAD8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNIP1Q8TAD8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNIP1Q8TAD8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNIP1Q8TAD8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNIP1Q8TAD8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNIP1Q8TAD8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNIP1Q8TAD8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SNIP1Q8TAD8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNIP1Q8TAD8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNIP1Q8TAD8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.99■□□□□ 0.63
SNIP1Q8TAD8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.99■□□□□ 0.63
SNIP1Q8TAD8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.99■□□□□ 0.63
SNIP1Q8TAD8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.99■□□□□ 0.63
SNIP1Q8TAD8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNIP1Q8TAD8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNIP1Q8TAD8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 AC023632.3-201ENST00000521633 145 ntBASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNIP1Q8TAD8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SNIP1Q8TAD8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNIP1Q8TAD8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.97■□□□□ 0.63
SNIP1Q8TAD8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNIP1Q8TAD8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNIP1Q8TAD8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNIP1Q8TAD8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNIP1Q8TAD8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.97■□□□□ 0.63
SNIP1Q8TAD8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNIP1Q8TAD8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.97■□□□□ 0.63
SNIP1Q8TAD8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
SNIP1Q8TAD8 WWOX-216ENST00000569818 525 ntBASIC18.97■□□□□ 0.63
SNIP1Q8TAD8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.97■□□□□ 0.63
SNIP1Q8TAD8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
SNIP1Q8TAD8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms