Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 AC010980.2-201ENST00000587099 1412 ntBASIC18.84■□□□□ 0.61
NUP43Q8NFH3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 AL512625.2-201ENST00000417533 625 ntBASIC18.84■□□□□ 0.61
NUP43Q8NFH3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 CDCA4P2-201ENST00000441182 718 ntBASIC18.84■□□□□ 0.61
NUP43Q8NFH3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP43Q8NFH3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NUP43Q8NFH3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.83■□□□□ 0.61
NUP43Q8NFH3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NUP43Q8NFH3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.83■□□□□ 0.61
NUP43Q8NFH3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NUP43Q8NFH3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NUP43Q8NFH3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.83■□□□□ 0.61
NUP43Q8NFH3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NUP43Q8NFH3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUP43Q8NFH3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUP43Q8NFH3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.83■□□□□ 0.6
NUP43Q8NFH3 AC093787.1-201ENST00000450396 207 ntBASIC18.83■□□□□ 0.6
NUP43Q8NFH3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.83■□□□□ 0.6
NUP43Q8NFH3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.83■□□□□ 0.6
NUP43Q8NFH3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.83■□□□□ 0.6
NUP43Q8NFH3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUP43Q8NFH3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUP43Q8NFH3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.83■□□□□ 0.6
NUP43Q8NFH3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NUP43Q8NFH3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUP43Q8NFH3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NUP43Q8NFH3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NUP43Q8NFH3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUP43Q8NFH3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.83■□□□□ 0.6
NUP43Q8NFH3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUP43Q8NFH3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NUP43Q8NFH3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.82■□□□□ 0.6
NUP43Q8NFH3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
NUP43Q8NFH3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NUP43Q8NFH3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUP43Q8NFH3 AC026185.1-201ENST00000445748 174 ntBASIC18.82■□□□□ 0.6
NUP43Q8NFH3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NUP43Q8NFH3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.82■□□□□ 0.6
NUP43Q8NFH3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUP43Q8NFH3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NUP43Q8NFH3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NUP43Q8NFH3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.82■□□□□ 0.6
NUP43Q8NFH3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUP43Q8NFH3 TCF3P1-201ENST00000423021 1937 ntBASIC18.82■□□□□ 0.6
NUP43Q8NFH3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUP43Q8NFH3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NUP43Q8NFH3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUP43Q8NFH3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NUP43Q8NFH3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms