Protein–RNA interactions for Protein: Q8N6F1

CLDN19, Claudin-19, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN19Q8N6F1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN19Q8N6F1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CLDN19Q8N6F1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.92■□□□□ 0.78
CLDN19Q8N6F1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN19Q8N6F1 AC091874.3-201ENST00000512672 1195 ntBASIC19.92■□□□□ 0.78
CLDN19Q8N6F1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN19Q8N6F1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN19Q8N6F1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.92■□□□□ 0.78
CLDN19Q8N6F1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDN19Q8N6F1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDN19Q8N6F1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN19Q8N6F1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN19Q8N6F1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN19Q8N6F1 PTBP1P-201ENST00000554374 1601 ntBASIC19.91■□□□□ 0.78
CLDN19Q8N6F1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN19Q8N6F1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN19Q8N6F1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN19Q8N6F1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN19Q8N6F1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN19Q8N6F1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN19Q8N6F1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
CLDN19Q8N6F1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN19Q8N6F1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN19Q8N6F1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN19Q8N6F1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 AC099778.1-201ENST00000568593 1911 ntBASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN19Q8N6F1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 AC069152.1-201ENST00000438030 544 ntBASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN19Q8N6F1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 AC097658.1-201ENST00000475555 843 ntBASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 MYC-209ENST00000641252 345 ntBASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN19Q8N6F1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN19Q8N6F1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN19Q8N6F1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN19Q8N6F1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN19Q8N6F1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN19Q8N6F1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.87■□□□□ 0.77
CLDN19Q8N6F1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN19Q8N6F1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLDN19Q8N6F1 AC073210.2-201ENST00000430369 194 ntBASIC19.87■□□□□ 0.77
CLDN19Q8N6F1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.87■□□□□ 0.77
CLDN19Q8N6F1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN19Q8N6F1 AC133041.1-202ENST00000642053 222 ntBASIC19.87■□□□□ 0.77
CLDN19Q8N6F1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN19Q8N6F1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms