Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AC105036.2-201ENST00000569468 176 ntBASIC19.85■□□□□ 0.77
APLFQ8IW19 AC066615.1-201ENST00000640911 628 ntBASIC19.85■□□□□ 0.77
APLFQ8IW19 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
APLFQ8IW19 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
APLFQ8IW19 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
APLFQ8IW19 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
APLFQ8IW19 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
APLFQ8IW19 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
APLFQ8IW19 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.84■□□□□ 0.77
APLFQ8IW19 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
APLFQ8IW19 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
APLFQ8IW19 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
APLFQ8IW19 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APLFQ8IW19 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.84■□□□□ 0.77
APLFQ8IW19 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
APLFQ8IW19 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APLFQ8IW19 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.84■□□□□ 0.77
APLFQ8IW19 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
APLFQ8IW19 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
APLFQ8IW19 AC013268.1-206ENST00000638368 961 ntBASIC19.84■□□□□ 0.77
APLFQ8IW19 AC112229.1-201ENST00000639295 961 ntBASIC19.84■□□□□ 0.77
APLFQ8IW19 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
APLFQ8IW19 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
APLFQ8IW19 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
APLFQ8IW19 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APLFQ8IW19 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APLFQ8IW19 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
APLFQ8IW19 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APLFQ8IW19 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APLFQ8IW19 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APLFQ8IW19 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
APLFQ8IW19 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
APLFQ8IW19 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
APLFQ8IW19 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
APLFQ8IW19 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.83■□□□□ 0.77
APLFQ8IW19 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
APLFQ8IW19 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
APLFQ8IW19 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
APLFQ8IW19 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
APLFQ8IW19 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
APLFQ8IW19 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
APLFQ8IW19 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.83■□□□□ 0.77
APLFQ8IW19 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
APLFQ8IW19 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.83■□□□□ 0.77
APLFQ8IW19 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
APLFQ8IW19 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
APLFQ8IW19 AP004607.7-201ENST00000527152 1677 ntBASIC19.83■□□□□ 0.76
APLFQ8IW19 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
APLFQ8IW19 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
APLFQ8IW19 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
APLFQ8IW19 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
APLFQ8IW19 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
APLFQ8IW19 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APLFQ8IW19 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
APLFQ8IW19 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APLFQ8IW19 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.82■□□□□ 0.76
APLFQ8IW19 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
APLFQ8IW19 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
APLFQ8IW19 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
APLFQ8IW19 AC004408.2-201ENST00000623613 2777 ntBASIC19.82■□□□□ 0.76
APLFQ8IW19 AP000974.1-201ENST00000623909 2387 ntBASIC19.82■□□□□ 0.76
APLFQ8IW19 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
APLFQ8IW19 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APLFQ8IW19 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.82■□□□□ 0.76
APLFQ8IW19 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.82■□□□□ 0.76
APLFQ8IW19 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.82■□□□□ 0.76
APLFQ8IW19 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.82■□□□□ 0.76
APLFQ8IW19 AL034346.1-201ENST00000568244 1277 ntBASIC19.82■□□□□ 0.76
APLFQ8IW19 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APLFQ8IW19 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
APLFQ8IW19 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APLFQ8IW19 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
APLFQ8IW19 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APLFQ8IW19 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.82■□□□□ 0.76
APLFQ8IW19 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.82■□□□□ 0.76
APLFQ8IW19 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
APLFQ8IW19 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APLFQ8IW19 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APLFQ8IW19 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APLFQ8IW19 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APLFQ8IW19 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.81■□□□□ 0.76
APLFQ8IW19 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APLFQ8IW19 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
APLFQ8IW19 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
APLFQ8IW19 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.81■□□□□ 0.76
APLFQ8IW19 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APLFQ8IW19 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.81■□□□□ 0.76
APLFQ8IW19 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
APLFQ8IW19 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
APLFQ8IW19 FAM201B-201ENST00000458407 597 ntBASIC19.81■□□□□ 0.76
APLFQ8IW19 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
APLFQ8IW19 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
APLFQ8IW19 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
APLFQ8IW19 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
APLFQ8IW19 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
APLFQ8IW19 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.8■□□□□ 0.76
APLFQ8IW19 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.8■□□□□ 0.76
APLFQ8IW19 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.8■□□□□ 0.76
APLFQ8IW19 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
APLFQ8IW19 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms