Protein–RNA interactions for Protein: Q8IUZ0

LRRC49, Leucine-rich repeat-containing protein 49, humanhuman

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49Q8IUZ0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC49Q8IUZ0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC49Q8IUZ0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC49Q8IUZ0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC49Q8IUZ0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 MYC-209ENST00000641252 345 ntBASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC49Q8IUZ0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 AL138781.1-201ENST00000566567 1274 ntBASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
LRRC49Q8IUZ0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC49Q8IUZ0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRRC49Q8IUZ0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LRRC49Q8IUZ0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LRRC49Q8IUZ0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.52■□□□□ 0.87
LRRC49Q8IUZ0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.87
LRRC49Q8IUZ0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.52■□□□□ 0.87
LRRC49Q8IUZ0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 BX119927.1-201ENST00000636596 1552 ntBASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 ID1-201ENST00000376105 1233 ntBASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 KRT16P6-202ENST00000425692 1426 ntBASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 AC099778.1-201ENST00000568593 1911 ntBASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC49Q8IUZ0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms