Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPAS4Q8IUM7 FBXW4P1-201ENST00000426721 2239 ntBASIC21.68■■□□□ 1.06
NPAS4Q8IUM7 NUDT16P1-203ENST00000513809 620 ntBASIC21.68■■□□□ 1.06
NPAS4Q8IUM7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPAS4Q8IUM7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.68■■□□□ 1.06
NPAS4Q8IUM7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.68■■□□□ 1.06
NPAS4Q8IUM7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
NPAS4Q8IUM7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPAS4Q8IUM7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NPAS4Q8IUM7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.68■■□□□ 1.06
NPAS4Q8IUM7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPAS4Q8IUM7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.68■■□□□ 1.06
NPAS4Q8IUM7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.68■■□□□ 1.06
NPAS4Q8IUM7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPAS4Q8IUM7 AL024507.2-201ENST00000606070 2574 ntBASIC21.68■■□□□ 1.06
NPAS4Q8IUM7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPAS4Q8IUM7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.67■■□□□ 1.06
NPAS4Q8IUM7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NPAS4Q8IUM7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.67■■□□□ 1.06
NPAS4Q8IUM7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPAS4Q8IUM7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.67■■□□□ 1.06
NPAS4Q8IUM7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NPAS4Q8IUM7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPAS4Q8IUM7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.67■■□□□ 1.06
NPAS4Q8IUM7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPAS4Q8IUM7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPAS4Q8IUM7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPAS4Q8IUM7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPAS4Q8IUM7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPAS4Q8IUM7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 PTBP1P-201ENST00000554374 1601 ntBASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 RBM17P1-201ENST00000453646 1190 ntBASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPAS4Q8IUM7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.65■■□□□ 1.06
NPAS4Q8IUM7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.65■■□□□ 1.06
NPAS4Q8IUM7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPAS4Q8IUM7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.65■■□□□ 1.06
NPAS4Q8IUM7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NPAS4Q8IUM7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NPAS4Q8IUM7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.65■■□□□ 1.06
NPAS4Q8IUM7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPAS4Q8IUM7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.65■■□□□ 1.06
NPAS4Q8IUM7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPAS4Q8IUM7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NPAS4Q8IUM7 KRT8P20-201ENST00000423953 1409 ntBASIC21.64■■□□□ 1.06
NPAS4Q8IUM7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NPAS4Q8IUM7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 TMPOP1-202ENST00000424642 1267 ntBASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 AL031963.3-201ENST00000606441 850 ntBASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.64■■□□□ 1.05
NPAS4Q8IUM7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPAS4Q8IUM7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
NPAS4Q8IUM7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.63■■□□□ 1.05
NPAS4Q8IUM7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPAS4Q8IUM7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPAS4Q8IUM7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.63■■□□□ 1.05
NPAS4Q8IUM7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
NPAS4Q8IUM7 REXO1L10P-201ENST00000615707 1290 ntBASIC21.63■■□□□ 1.05
NPAS4Q8IUM7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPAS4Q8IUM7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPAS4Q8IUM7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
NPAS4Q8IUM7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
NPAS4Q8IUM7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.63■■□□□ 1.05
NPAS4Q8IUM7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms