Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 CDV3P1-201ENST00000471403 739 ntBASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 FAM21FP-204ENST00000608637 956 ntBASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 RBM17P2-201ENST00000616397 1405 ntBASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 FER1L4-210ENST00000615531 5998 ntBASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 AL391422.3-201ENST00000603791 2761 ntBASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL55Q7Z7F7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 ZNRF2P3-201ENST00000424200 374 ntBASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL55Q7Z7F7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 AL162377.1-201ENST00000618844 1793 ntBASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 AC091799.1-201ENST00000422823 811 ntBASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL55Q7Z7F7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
MRPL55Q7Z7F7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 AC019069.1-201ENST00000610008 1333 ntBASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL55Q7Z7F7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms