Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC125437.2-201ENST00000625180 2167 ntBASIC19.23■□□□□ 0.67
PPP4R4Q6NUP7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PPP4R4Q6NUP7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PPP4R4Q6NUP7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.23■□□□□ 0.67
PPP4R4Q6NUP7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PPP4R4Q6NUP7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.23■□□□□ 0.67
PPP4R4Q6NUP7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PPP4R4Q6NUP7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PPP4R4Q6NUP7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 AP006587.3-201ENST00000525742 1516 ntBASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 AC005224.4-201ENST00000583262 1652 ntBASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PPP4R4Q6NUP7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 NTF6G-201ENST00000591094 616 ntBASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PPP4R4Q6NUP7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 KRT18P5-201ENST00000436075 1291 ntBASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R4Q6NUP7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 AC004408.2-201ENST00000623613 2777 ntBASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 AL158211.5-201ENST00000623583 2518 ntBASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R4Q6NUP7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms