Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTCRAQ6ISU1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTCRAQ6ISU1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTCRAQ6ISU1 INGX-201ENST00000359239 846 ntBASIC20.88■□□□□ 0.93
PTCRAQ6ISU1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTCRAQ6ISU1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.88■□□□□ 0.93
PTCRAQ6ISU1 AC092647.4-201ENST00000457211 535 ntBASIC20.88■□□□□ 0.93
PTCRAQ6ISU1 DGCR10-201ENST00000609839 495 ntBASIC20.88■□□□□ 0.93
PTCRAQ6ISU1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTCRAQ6ISU1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTCRAQ6ISU1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PTCRAQ6ISU1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.88■□□□□ 0.93
PTCRAQ6ISU1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTCRAQ6ISU1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTCRAQ6ISU1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.87■□□□□ 0.93
PTCRAQ6ISU1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTCRAQ6ISU1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTCRAQ6ISU1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTCRAQ6ISU1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.87■□□□□ 0.93
PTCRAQ6ISU1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.87■□□□□ 0.93
PTCRAQ6ISU1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTCRAQ6ISU1 PCED1CP-201ENST00000419887 785 ntBASIC20.87■□□□□ 0.93
PTCRAQ6ISU1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTCRAQ6ISU1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.87■□□□□ 0.93
PTCRAQ6ISU1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PTCRAQ6ISU1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTCRAQ6ISU1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTCRAQ6ISU1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 FAM207BP-201ENST00000447172 505 ntBASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 AC097488.1-201ENST00000507834 756 ntBASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 AC026271.3-201ENST00000571884 352 ntBASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTCRAQ6ISU1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.85■□□□□ 0.93
PTCRAQ6ISU1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTCRAQ6ISU1 HMGA1P5-201ENST00000412453 271 ntBASIC20.85■□□□□ 0.93
PTCRAQ6ISU1 TSPY5P-201ENST00000426936 936 ntBASIC20.85■□□□□ 0.93
PTCRAQ6ISU1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.85■□□□□ 0.93
PTCRAQ6ISU1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PTCRAQ6ISU1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.85■□□□□ 0.93
PTCRAQ6ISU1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.85■□□□□ 0.93
PTCRAQ6ISU1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTCRAQ6ISU1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PTCRAQ6ISU1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTCRAQ6ISU1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 YBX1P2-201ENST00000489612 999 ntBASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 IER3-202ENST00000376377 1350 ntBASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTCRAQ6ISU1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTCRAQ6ISU1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PTCRAQ6ISU1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTCRAQ6ISU1 AC080038.3-201ENST00000623346 1952 ntBASIC20.83■□□□□ 0.93
PTCRAQ6ISU1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTCRAQ6ISU1 B3GAT3P1-201ENST00000471720 806 ntBASIC20.83■□□□□ 0.93
PTCRAQ6ISU1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTCRAQ6ISU1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.83■□□□□ 0.93
PTCRAQ6ISU1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.83■□□□□ 0.93
PTCRAQ6ISU1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.83■□□□□ 0.93
PTCRAQ6ISU1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 HCG4P8-203ENST00000443049 980 ntBASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 FAM86EP-206ENST00000510506 987 ntBASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 AL138966.2-201ENST00000621997 464 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms