Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LPCAT4Q643R3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
LPCAT4Q643R3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.94■□□□□ 0.62
LPCAT4Q643R3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LPCAT4Q643R3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.94■□□□□ 0.62
LPCAT4Q643R3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LPCAT4Q643R3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
LPCAT4Q643R3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LPCAT4Q643R3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LPCAT4Q643R3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LPCAT4Q643R3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
LPCAT4Q643R3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LPCAT4Q643R3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LPCAT4Q643R3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LPCAT4Q643R3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LPCAT4Q643R3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.92■□□□□ 0.62
LPCAT4Q643R3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 LINC01465-201ENST00000408887 1940 ntBASIC18.91■□□□□ 0.62
LPCAT4Q643R3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LPCAT4Q643R3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 AL032819.2-201ENST00000624543 2162 ntBASIC18.9■□□□□ 0.62
LPCAT4Q643R3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 PCDHB18P-201ENST00000524813 2368 ntBASIC18.9■□□□□ 0.62
LPCAT4Q643R3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LPCAT4Q643R3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LPCAT4Q643R3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LPCAT4Q643R3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms