Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCDC30Q5VVM6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCDC30Q5VVM6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC25.69■■□□□ 1.7
CCDC30Q5VVM6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC25.69■■□□□ 1.7
CCDC30Q5VVM6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCDC30Q5VVM6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC25.69■■□□□ 1.7
CCDC30Q5VVM6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC25.69■■□□□ 1.7
CCDC30Q5VVM6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC25.69■■□□□ 1.7
CCDC30Q5VVM6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCDC30Q5VVM6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
CCDC30Q5VVM6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CCDC30Q5VVM6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCDC30Q5VVM6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC25.69■■□□□ 1.7
CCDC30Q5VVM6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCDC30Q5VVM6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CCDC30Q5VVM6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 GCSHP5-201ENST00000443090 522 ntBASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 RN7SL471P-201ENST00000580476 299 ntBASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC30Q5VVM6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 RPS2P52-201ENST00000469610 820 ntBASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC30Q5VVM6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
CCDC30Q5VVM6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC30Q5VVM6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CCDC30Q5VVM6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC30Q5VVM6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC30Q5VVM6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC30Q5VVM6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC30Q5VVM6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
CCDC30Q5VVM6 AC142381.4-202ENST00000563973 229 ntBASIC25.66■■□□□ 1.7
CCDC30Q5VVM6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC25.66■■□□□ 1.7
CCDC30Q5VVM6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC25.66■■□□□ 1.7
CCDC30Q5VVM6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
CCDC30Q5VVM6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC30Q5VVM6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.65■■□□□ 1.7
CCDC30Q5VVM6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CCDC30Q5VVM6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CCDC30Q5VVM6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CCDC30Q5VVM6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC25.65■■□□□ 1.7
CCDC30Q5VVM6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC25.65■■□□□ 1.7
CCDC30Q5VVM6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CCDC30Q5VVM6 MTDHP1-201ENST00000605323 784 ntBASIC25.65■■□□□ 1.7
CCDC30Q5VVM6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC25.65■■□□□ 1.7
CCDC30Q5VVM6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC25.65■■□□□ 1.7
CCDC30Q5VVM6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.65■■□□□ 1.7
CCDC30Q5VVM6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC30Q5VVM6 AC020907.5-201ENST00000624372 1936 ntBASIC25.65■■□□□ 1.7
CCDC30Q5VVM6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC30Q5VVM6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC30Q5VVM6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC30Q5VVM6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC30Q5VVM6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
CCDC30Q5VVM6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC25.64■■□□□ 1.7
CCDC30Q5VVM6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC25.64■■□□□ 1.7
CCDC30Q5VVM6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC30Q5VVM6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC30Q5VVM6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC30Q5VVM6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC30Q5VVM6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC30Q5VVM6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.69
CCDC30Q5VVM6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC30Q5VVM6 SMG8-203ENST00000578922 2178 ntBASIC25.63■■□□□ 1.69
CCDC30Q5VVM6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
CCDC30Q5VVM6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC30Q5VVM6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.63■■□□□ 1.69
CCDC30Q5VVM6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
CCDC30Q5VVM6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC30Q5VVM6 AC073314.1-201ENST00000568729 2216 ntBASIC25.63■■□□□ 1.69
CCDC30Q5VVM6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
CCDC30Q5VVM6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC30Q5VVM6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC30Q5VVM6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC30Q5VVM6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms