Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 KRT18P57-201ENST00000443599 1254 ntBASIC30.71■■■□□ 2.51
CDC42BPAQ5VT25 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CDC42BPAQ5VT25 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC30.71■■■□□ 2.51
CDC42BPAQ5VT25 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC30.71■■■□□ 2.51
CDC42BPAQ5VT25 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC30.71■■■□□ 2.51
CDC42BPAQ5VT25 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC30.71■■■□□ 2.51
CDC42BPAQ5VT25 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC30.71■■■□□ 2.51
CDC42BPAQ5VT25 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CDC42BPAQ5VT25 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CDC42BPAQ5VT25 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CDC42BPAQ5VT25 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CDC42BPAQ5VT25 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.7■■■□□ 2.51
CDC42BPAQ5VT25 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CDC42BPAQ5VT25 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC30.7■■■□□ 2.51
CDC42BPAQ5VT25 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC30.7■■■□□ 2.51
CDC42BPAQ5VT25 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.7■■■□□ 2.51
CDC42BPAQ5VT25 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC30.7■■■□□ 2.51
CDC42BPAQ5VT25 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.7■■■□□ 2.51
CDC42BPAQ5VT25 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC30.7■■■□□ 2.51
CDC42BPAQ5VT25 CBFB-203ENST00000561924 584 ntTSL 5 BASIC30.7■■■□□ 2.51
CDC42BPAQ5VT25 AC004264.1-201ENST00000608354 794 ntBASIC30.7■■■□□ 2.51
CDC42BPAQ5VT25 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
CDC42BPAQ5VT25 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CDC42BPAQ5VT25 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
CDC42BPAQ5VT25 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CDC42BPAQ5VT25 CYP2D8P-201ENST00000433633 1490 ntBASIC30.69■■■□□ 2.5
CDC42BPAQ5VT25 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CDC42BPAQ5VT25 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC30.69■■■□□ 2.5
CDC42BPAQ5VT25 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC30.69■■■□□ 2.5
CDC42BPAQ5VT25 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC30.69■■■□□ 2.5
CDC42BPAQ5VT25 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
CDC42BPAQ5VT25 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 TERF1P1-201ENST00000311003 1181 ntBASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 KSR1P1-201ENST00000446298 240 ntBASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 AP002982.1-201ENST00000492365 877 ntBASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC30.68■■■□□ 2.5
CDC42BPAQ5VT25 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 AC005521.1-201ENST00000393351 872 ntBASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 AC010947.1-201ENST00000623454 693 ntBASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 CRAT-202ENST00000393384 973 ntTSL 2 BASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC30.67■■■□□ 2.5
CDC42BPAQ5VT25 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CDC42BPAQ5VT25 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC30.66■■■□□ 2.5
CDC42BPAQ5VT25 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC30.66■■■□□ 2.5
CDC42BPAQ5VT25 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC30.66■■■□□ 2.5
CDC42BPAQ5VT25 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CDC42BPAQ5VT25 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CDC42BPAQ5VT25 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
CDC42BPAQ5VT25 AL049796.1-201ENST00000565336 1766 ntBASIC30.66■■■□□ 2.5
CDC42BPAQ5VT25 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
CDC42BPAQ5VT25 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CDC42BPAQ5VT25 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDC42BPAQ5VT25 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC30.65■■■□□ 2.5
CDC42BPAQ5VT25 SLC25A3P1-201ENST00000443844 931 ntBASIC30.65■■■□□ 2.5
CDC42BPAQ5VT25 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC30.65■■■□□ 2.5
CDC42BPAQ5VT25 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
CDC42BPAQ5VT25 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDC42BPAQ5VT25 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDC42BPAQ5VT25 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC30.64■■■□□ 2.5
CDC42BPAQ5VT25 MIR1238-201ENST00000408483 83 ntBASIC30.64■■■□□ 2.5
CDC42BPAQ5VT25 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CDC42BPAQ5VT25 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC30.64■■■□□ 2.5
CDC42BPAQ5VT25 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC30.64■■■□□ 2.5
CDC42BPAQ5VT25 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CDC42BPAQ5VT25 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CDC42BPAQ5VT25 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC30.64■■■□□ 2.5
CDC42BPAQ5VT25 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CDC42BPAQ5VT25 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CDC42BPAQ5VT25 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CDC42BPAQ5VT25 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC30.64■■■□□ 2.5
CDC42BPAQ5VT25 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC30.64■■■□□ 2.5
CDC42BPAQ5VT25 AC026271.3-201ENST00000571884 352 ntBASIC30.64■■■□□ 2.5
CDC42BPAQ5VT25 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC30.64■■■□□ 2.5
CDC42BPAQ5VT25 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CDC42BPAQ5VT25 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC30.63■■■□□ 2.49
CDC42BPAQ5VT25 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms