Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 MIR638-201ENST00000385237 100 ntBASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 KRT19P1-201ENST00000405746 1186 ntBASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 KRT18P61-201ENST00000585825 1298 ntBASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRIF1Q5T3J3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 UBE2DNL-204ENST00000602536 740 ntBASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.96■□□□□ 0.63
LRIF1Q5T3J3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 MYCNOS-205ENST00000641950 531 ntBASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
LRIF1Q5T3J3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.94■□□□□ 0.62
LRIF1Q5T3J3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRIF1Q5T3J3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.94■□□□□ 0.62
LRIF1Q5T3J3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.94■□□□□ 0.62
LRIF1Q5T3J3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.94■□□□□ 0.62
LRIF1Q5T3J3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.94■□□□□ 0.62
LRIF1Q5T3J3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRIF1Q5T3J3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.94■□□□□ 0.62
LRIF1Q5T3J3 AC005332.7-201ENST00000614046 2005 ntBASIC18.94■□□□□ 0.62
LRIF1Q5T3J3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRIF1Q5T3J3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LRIF1Q5T3J3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.94■□□□□ 0.62
LRIF1Q5T3J3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.94■□□□□ 0.62
LRIF1Q5T3J3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRIF1Q5T3J3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 CYP21A1P-202ENST00000354927 1481 ntBASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 AC087289.5-201ENST00000586076 3175 ntBASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LRIF1Q5T3J3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRIF1Q5T3J3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms