Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 TERF1P2-201ENST00000583350 1212 ntBASIC19.3■□□□□ 0.68
PDCD4Q53EL6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDCD4Q53EL6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDCD4Q53EL6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 AC019069.1-201ENST00000610008 1333 ntBASIC19.28■□□□□ 0.68
PDCD4Q53EL6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 CDV3P1-201ENST00000471403 739 ntBASIC19.28■□□□□ 0.68
PDCD4Q53EL6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDCD4Q53EL6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
PDCD4Q53EL6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDCD4Q53EL6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDCD4Q53EL6 AC018445.3-201ENST00000624177 1945 ntBASIC19.27■□□□□ 0.68
PDCD4Q53EL6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.27■□□□□ 0.68
PDCD4Q53EL6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.27■□□□□ 0.68
PDCD4Q53EL6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDCD4Q53EL6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PDCD4Q53EL6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDCD4Q53EL6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.27■□□□□ 0.68
PDCD4Q53EL6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PDCD4Q53EL6 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.27■□□□□ 0.68
PDCD4Q53EL6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDCD4Q53EL6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDCD4Q53EL6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDCD4Q53EL6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDCD4Q53EL6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.27■□□□□ 0.67
PDCD4Q53EL6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDCD4Q53EL6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDCD4Q53EL6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDCD4Q53EL6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDCD4Q53EL6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDCD4Q53EL6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDCD4Q53EL6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDCD4Q53EL6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDCD4Q53EL6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDCD4Q53EL6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDCD4Q53EL6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.26■□□□□ 0.67
PDCD4Q53EL6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDCD4Q53EL6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.26■□□□□ 0.67
PDCD4Q53EL6 AC097381.1-201ENST00000429019 1296 ntBASIC19.26■□□□□ 0.67
PDCD4Q53EL6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.26■□□□□ 0.67
PDCD4Q53EL6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.26■□□□□ 0.67
PDCD4Q53EL6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms