Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HLA-BQ31612 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-BQ31612 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HLA-BQ31612 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-BQ31612 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-BQ31612 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-BQ31612 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-BQ31612 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HLA-BQ31612 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-BQ31612 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-BQ31612 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-BQ31612 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-BQ31612 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-BQ31612 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
HLA-BQ31612 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HLA-BQ31612 HLA-G-202ENST00000376815 851 ntBASIC19.62■□□□□ 0.73
HLA-BQ31612 HLA-G-203ENST00000376818 1127 ntBASIC19.62■□□□□ 0.73
HLA-BQ31612 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-BQ31612 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-BQ31612 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-BQ31612 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.62■□□□□ 0.73
HLA-BQ31612 CR392000.1-201ENST00000624770 1228 ntBASIC19.62■□□□□ 0.73
HLA-BQ31612 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
HLA-BQ31612 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-BQ31612 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-BQ31612 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-BQ31612 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-BQ31612 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
HLA-BQ31612 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-BQ31612 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-BQ31612 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-BQ31612 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-BQ31612 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-BQ31612 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-BQ31612 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-BQ31612 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-BQ31612 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-BQ31612 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-BQ31612 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-BQ31612 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.61■□□□□ 0.73
HLA-BQ31612 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-BQ31612 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-BQ31612 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HLA-BQ31612 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.61■□□□□ 0.73
HLA-BQ31612 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-BQ31612 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-BQ31612 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
HLA-BQ31612 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-BQ31612 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-BQ31612 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
HLA-BQ31612 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-BQ31612 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-BQ31612 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-BQ31612 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-BQ31612 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-BQ31612 ECEL1P1-201ENST00000373592 1742 ntBASIC19.6■□□□□ 0.73
HLA-BQ31612 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-BQ31612 AC113347.1-201ENST00000413321 391 ntBASIC19.6■□□□□ 0.73
HLA-BQ31612 AL390955.1-201ENST00000428694 934 ntBASIC19.6■□□□□ 0.73
HLA-BQ31612 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-BQ31612 KSR1P1-201ENST00000446298 240 ntBASIC19.6■□□□□ 0.73
HLA-BQ31612 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.6■□□□□ 0.73
HLA-BQ31612 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.6■□□□□ 0.73
HLA-BQ31612 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.6■□□□□ 0.73
HLA-BQ31612 NAPSB-206ENST00000562112 1266 ntBASIC19.6■□□□□ 0.73
HLA-BQ31612 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-BQ31612 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-BQ31612 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
HLA-BQ31612 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.6■□□□□ 0.73
HLA-BQ31612 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-BQ31612 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-BQ31612 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HLA-BQ31612 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
HLA-BQ31612 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-BQ31612 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-BQ31612 KRT18P57-201ENST00000443599 1254 ntBASIC19.59■□□□□ 0.73
HLA-BQ31612 AC116562.2-201ENST00000507042 360 ntBASIC19.59■□□□□ 0.73
HLA-BQ31612 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.59■□□□□ 0.73
HLA-BQ31612 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-BQ31612 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-BQ31612 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.59■□□□□ 0.73
HLA-BQ31612 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-BQ31612 CYP2D8P-201ENST00000433633 1490 ntBASIC19.59■□□□□ 0.73
HLA-BQ31612 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-BQ31612 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-BQ31612 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-BQ31612 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-BQ31612 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-BQ31612 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-BQ31612 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-BQ31612 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
HLA-BQ31612 KRT18P22-201ENST00000402024 1347 ntBASIC19.58■□□□□ 0.73
HLA-BQ31612 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
HLA-BQ31612 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-BQ31612 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.58■□□□□ 0.73
HLA-BQ31612 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-BQ31612 NIFKP9-201ENST00000419265 221 ntBASIC19.58■□□□□ 0.72
HLA-BQ31612 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.58■□□□□ 0.72
HLA-BQ31612 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.58■□□□□ 0.72
HLA-BQ31612 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms