Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC006128.1-201ENST00000624704 1661 ntBASIC17.17■□□□□ 0.34
EFNB3Q15768 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB3Q15768 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB3Q15768 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB3Q15768 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
EFNB3Q15768 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB3Q15768 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB3Q15768 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.17■□□□□ 0.34
EFNB3Q15768 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.17■□□□□ 0.34
EFNB3Q15768 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB3Q15768 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.17■□□□□ 0.34
EFNB3Q15768 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.17■□□□□ 0.34
EFNB3Q15768 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB3Q15768 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
EFNB3Q15768 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB3Q15768 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.17■□□□□ 0.34
EFNB3Q15768 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.17■□□□□ 0.34
EFNB3Q15768 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.17■□□□□ 0.34
EFNB3Q15768 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.17■□□□□ 0.34
EFNB3Q15768 MTDHP1-201ENST00000605323 784 ntBASIC17.17■□□□□ 0.34
EFNB3Q15768 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
EFNB3Q15768 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB3Q15768 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB3Q15768 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.17■□□□□ 0.34
EFNB3Q15768 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB3Q15768 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.17■□□□□ 0.34
EFNB3Q15768 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB3Q15768 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB3Q15768 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
EFNB3Q15768 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB3Q15768 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB3Q15768 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.16■□□□□ 0.34
EFNB3Q15768 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.16■□□□□ 0.34
EFNB3Q15768 AF106564.1-201ENST00000607058 2553 ntBASIC17.16■□□□□ 0.34
EFNB3Q15768 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB3Q15768 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB3Q15768 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB3Q15768 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
EFNB3Q15768 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.16■□□□□ 0.34
EFNB3Q15768 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.16■□□□□ 0.34
EFNB3Q15768 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.16■□□□□ 0.34
EFNB3Q15768 FAM197Y4-202ENST00000622692 608 ntBASIC17.16■□□□□ 0.34
EFNB3Q15768 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.16■□□□□ 0.34
EFNB3Q15768 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB3Q15768 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB3Q15768 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
EFNB3Q15768 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
EFNB3Q15768 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
EFNB3Q15768 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB3Q15768 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB3Q15768 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.15■□□□□ 0.34
EFNB3Q15768 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.15■□□□□ 0.34
EFNB3Q15768 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB3Q15768 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
EFNB3Q15768 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB3Q15768 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.15■□□□□ 0.34
EFNB3Q15768 HLA-G-202ENST00000376815 851 ntBASIC17.15■□□□□ 0.34
EFNB3Q15768 HLA-G-203ENST00000376818 1127 ntBASIC17.15■□□□□ 0.34
EFNB3Q15768 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.15■□□□□ 0.34
EFNB3Q15768 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.15■□□□□ 0.34
EFNB3Q15768 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.15■□□□□ 0.34
EFNB3Q15768 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.15■□□□□ 0.34
EFNB3Q15768 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB3Q15768 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.15■□□□□ 0.34
EFNB3Q15768 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.15■□□□□ 0.34
EFNB3Q15768 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.15■□□□□ 0.34
EFNB3Q15768 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.15■□□□□ 0.34
EFNB3Q15768 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.15■□□□□ 0.34
EFNB3Q15768 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
EFNB3Q15768 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
EFNB3Q15768 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB3Q15768 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB3Q15768 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
EFNB3Q15768 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB3Q15768 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
EFNB3Q15768 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB3Q15768 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB3Q15768 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
EFNB3Q15768 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
EFNB3Q15768 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.14■□□□□ 0.33
EFNB3Q15768 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
EFNB3Q15768 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.14■□□□□ 0.33
EFNB3Q15768 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.14■□□□□ 0.33
EFNB3Q15768 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.14■□□□□ 0.33
EFNB3Q15768 AC133681.1-201ENST00000465482 601 ntBASIC17.14■□□□□ 0.33
EFNB3Q15768 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
EFNB3Q15768 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.14■□□□□ 0.33
EFNB3Q15768 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.14■□□□□ 0.33
EFNB3Q15768 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.14■□□□□ 0.33
EFNB3Q15768 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms