Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 UTP10YJL109C 5310 nt0.49□□□□□ -2.33
SHH3Q04487 NPC2YDL046W 522 nt0.48□□□□□ -2.33
SHH3Q04487 YGL239CYGL239C 315 nt0.48□□□□□ -2.33
SHH3Q04487 YGR025WYGR025W 303 nt0.48□□□□□ -2.33
SHH3Q04487 PHS1YJL097W 654 nt0.48□□□□□ -2.33
SHH3Q04487 IES4YOR189W 351 nt0.48□□□□□ -2.33
SHH3Q04487 YJR003CYJR003C 1560 nt0.48□□□□□ -2.33
SHH3Q04487 GEA2YEL022W 4380 nt0.47□□□□□ -2.33
SHH3Q04487 SVS1YPL163C 783 nt0.47□□□□□ -2.33
SHH3Q04487 YAR009CYAR009C 3591 nt0.47□□□□□ -2.33
SHH3Q04487 LTE1YAL024C 4308 nt0.47□□□□□ -2.33
SHH3Q04487 DBP6YNR038W 1890 nt0.46□□□□□ -2.34
SHH3Q04487 COG4YPR105C 2586 nt0.46□□□□□ -2.34
SHH3Q04487 YDR269CYDR269C 324 nt0.46□□□□□ -2.34
SHH3Q04487 ALG13YGL047W 609 nt0.46□□□□□ -2.34
SHH3Q04487 YIL142C-AYIL142C-A 333 nt0.46□□□□□ -2.34
SHH3Q04487 UBX4YMR067C 1251 nt0.45□□□□□ -2.34
SHH3Q04487 snR13snR13 124 nt0.45□□□□□ -2.34
SHH3Q04487 SNU56YDR240C 1479 nt0.45□□□□□ -2.34
SHH3Q04487 BFR2YDR299W 1605 nt0.45□□□□□ -2.34
SHH3Q04487 PRE4YFR050C 801 nt0.44□□□□□ -2.34
SHH3Q04487 YHR063W-AYHR063W-A 336 nt0.44□□□□□ -2.34
SHH3Q04487 YMR141W-AYMR141W-A 225 nt0.44□□□□□ -2.34
SHH3Q04487 ZIP2YGL249W 2115 nt0.43□□□□□ -2.34
SHH3Q04487 ISD11YER048W-A 285 nt0.43□□□□□ -2.34
SHH3Q04487 ECM12YHR021W-A 456 nt0.43□□□□□ -2.34
SHH3Q04487 PAC1YOR269W 1485 nt0.42□□□□□ -2.34
SHH3Q04487 URM1YIL008W 300 nt0.42□□□□□ -2.34
SHH3Q04487 RPL38YLR325C 237 nt0.42□□□□□ -2.34
SHH3Q04487 LOA1YPR139C 903 nt0.42□□□□□ -2.34
SHH3Q04487 HMLALPHA2YCL067C 633 nt0.41□□□□□ -2.34
SHH3Q04487 MATALPHA2YCR039C 633 nt0.41□□□□□ -2.34
SHH3Q04487 YFL012WYFL012W 447 nt0.41□□□□□ -2.34
SHH3Q04487 PAN2YGL094C 3348 nt0.41□□□□□ -2.34
SHH3Q04487 EFR3YMR212C 2349 nt0.4□□□□□ -2.35
SHH3Q04487 YHL042WYHL042W 453 nt0.4□□□□□ -2.35
SHH3Q04487 YIL066W-AYIL066W-A 444 nt0.4□□□□□ -2.35
SHH3Q04487 YJL135WYJL135W 318 nt0.4□□□□□ -2.35
SHH3Q04487 YER087C-AYER087C-A 552 nt0.39□□□□□ -2.35
SHH3Q04487 GPG1YGL121C 381 nt0.39□□□□□ -2.35
SHH3Q04487 UBP3YER151C 2739 nt0.38□□□□□ -2.35
SHH3Q04487 PMP1YCR024C-A 123 nt0.38□□□□□ -2.35
SHH3Q04487 YDR029WYDR029W 315 nt0.38□□□□□ -2.35
SHH3Q04487 RPL9AYGL147C 576 nt0.38□□□□□ -2.35
SHH3Q04487 TSC3YBR058C-A 243 nt0.38□□□□□ -2.35
SHH3Q04487 CHS6YJL099W 2241 nt0.38□□□□□ -2.35
SHH3Q04487 NOP9YJL010C 2001 nt0.37□□□□□ -2.35
SHH3Q04487 INA22YIR024C 651 nt0.36□□□□□ -2.35
SHH3Q04487 YNL319WYNL319W 441 nt0.36□□□□□ -2.35
SHH3Q04487 YOR108C-AYOR108C-A 210 nt0.36□□□□□ -2.35
SHH3Q04487 OST1YJL002C 1431 nt0.36□□□□□ -2.35
SHH3Q04487 PKH2YOL100W 3246 nt0.36□□□□□ -2.35
SHH3Q04487 snR72snR72 98 nt0.35□□□□□ -2.35
SHH3Q04487 YDR344CYDR344C 444 nt0.35□□□□□ -2.35
SHH3Q04487 NFU1YKL040C 771 nt0.35□□□□□ -2.35
SHH3Q04487 RPS27AYKL156W 249 nt0.35□□□□□ -2.35
SHH3Q04487 YLR269CYLR269C 351 nt0.35□□□□□ -2.35
SHH3Q04487 YMR290W-AYMR290W-A 348 nt0.35□□□□□ -2.35
SHH3Q04487 RPB10YOR210W 213 nt0.35□□□□□ -2.35
SHH3Q04487 YOR282WYOR282W 321 nt0.35□□□□□ -2.35
SHH3Q04487 NPR2YEL062W 1848 nt0.35□□□□□ -2.35
SHH3Q04487 YLL007CYLL007C 1998 nt0.34□□□□□ -2.35
SHH3Q04487 YCR001WYCR001W 315 nt0.34□□□□□ -2.36
SHH3Q04487 snR78snR78 87 nt0.34□□□□□ -2.36
SHH3Q04487 BIG1YHR101C 1008 nt0.34□□□□□ -2.36
SHH3Q04487 YOL160WYOL160W 342 nt0.34□□□□□ -2.36
SHH3Q04487 YPL182CYPL182C 384 nt0.34□□□□□ -2.36
SHH3Q04487 YBR076C-AYBR076C-A 267 nt0.34□□□□□ -2.36
SHH3Q04487 WIP1YDR374W-A 270 nt0.33□□□□□ -2.36
SHH3Q04487 TIM13YGR181W 318 nt0.33□□□□□ -2.36
SHH3Q04487 YKL202WYKL202W 582 nt0.33□□□□□ -2.36
SHH3Q04487 YOR072W-AYOR072W-A 249 nt0.33□□□□□ -2.36
SHH3Q04487 YCK3YER123W 1575 nt0.32□□□□□ -2.36
SHH3Q04487 GPI15YNL038W 690 nt0.32□□□□□ -2.36
SHH3Q04487 YPL261CYPL261C 309 nt0.32□□□□□ -2.36
SHH3Q04487 RAD34YDR314C 2079 nt0.32□□□□□ -2.36
SHH3Q04487 YMR160WYMR160W 2451 nt0.32□□□□□ -2.36
SHH3Q04487 YIL134C-AYIL134C-A 204 nt0.31□□□□□ -2.36
SHH3Q04487 YBL008W-AYBL008W-A 240 nt0.31□□□□□ -2.36
SHH3Q04487 YOR218CYOR218C 420 nt0.31□□□□□ -2.36
SHH3Q04487 YSP1YHR155W 3687 nt0.31□□□□□ -2.36
SHH3Q04487 YKL123WYKL123W 381 nt0.3□□□□□ -2.36
SHH3Q04487 UBC7YMR022W 498 nt0.3□□□□□ -2.36
SHH3Q04487 CDC33YOL139C 642 nt0.3□□□□□ -2.36
SHH3Q04487 YBR064WYBR064W 429 nt0.3□□□□□ -2.36
SHH3Q04487 EMC4YGL231C 573 nt0.29□□□□□ -2.36
SHH3Q04487 RPL26BYGR034W 384 nt0.29□□□□□ -2.36
SHH3Q04487 RPF1YHR088W 888 nt0.29□□□□□ -2.36
SHH3Q04487 BSC3YLR465C 309 nt0.29□□□□□ -2.36
SHH3Q04487 ABF2YMR072W 552 nt0.29□□□□□ -2.36
SHH3Q04487 tR(UCU)Q1tR(UCU)Q1 73 nt0.28□□□□□ -2.36
SHH3Q04487 RPS24BYIL069C 408 nt0.28□□□□□ -2.36
SHH3Q04487 YPL044CYPL044C 549 nt0.28□□□□□ -2.36
SHH3Q04487 snR51snR51 107 nt0.28□□□□□ -2.36
SHH3Q04487 MCM10YIL150C 1716 nt0.27□□□□□ -2.37
SHH3Q04487 SBH1YER087C-B 249 nt0.26□□□□□ -2.37
SHH3Q04487 YJL020W-AYJL020W-A 258 nt0.26□□□□□ -2.37
SHH3Q04487 SDH7YDR511W 402 nt0.25□□□□□ -2.37
SHH3Q04487 YER084W-AYER084W-A 513 nt0.25□□□□□ -2.37
SHH3Q04487 OLI1Q0130 231 nt0.25□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 89.5 ms