Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 ZNRF2P3-201ENST00000424200 374 ntBASIC15.34■□□□□ 0.05
HIST1H1AQ02539 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 AC018445.3-201ENST00000624177 1945 ntBASIC15.34■□□□□ 0.05
HIST1H1AQ02539 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 BX323043.1-201ENST00000641006 1765 ntBASIC15.34■□□□□ 0.05
HIST1H1AQ02539 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 AC004854.2-201ENST00000608450 1441 ntBASIC15.34■□□□□ 0.05
HIST1H1AQ02539 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST1H1AQ02539 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
HIST1H1AQ02539 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HIST1H1AQ02539 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
HIST1H1AQ02539 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.33■□□□□ 0.05
HIST1H1AQ02539 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.33■□□□□ 0.05
HIST1H1AQ02539 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HIST1H1AQ02539 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HIST1H1AQ02539 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.33■□□□□ 0.04
HIST1H1AQ02539 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 AC116050.2-201ENST00000612102 1779 ntBASIC15.32■□□□□ 0.04
HIST1H1AQ02539 AL162377.1-201ENST00000618844 1793 ntBASIC15.32■□□□□ 0.04
HIST1H1AQ02539 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HIST1H1AQ02539 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 PCDHAC2-203ENST00000615316 3011 ntBASIC15.31■□□□□ 0.04
HIST1H1AQ02539 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 KRT18P20-201ENST00000548986 1279 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms