Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL1Q00532 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL1Q00532 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.78■□□□□ 0.76
CDKL1Q00532 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.78■□□□□ 0.76
CDKL1Q00532 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL1Q00532 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.78■□□□□ 0.76
CDKL1Q00532 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL1Q00532 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL1Q00532 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.78■□□□□ 0.76
CDKL1Q00532 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL1Q00532 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CDKL1Q00532 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CDKL1Q00532 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL1Q00532 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.77■□□□□ 0.76
CDKL1Q00532 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL1Q00532 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL1Q00532 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CDKL1Q00532 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL1Q00532 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.77■□□□□ 0.76
CDKL1Q00532 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.77■□□□□ 0.76
CDKL1Q00532 AC069236.1-201ENST00000604339 616 ntBASIC19.77■□□□□ 0.76
CDKL1Q00532 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.77■□□□□ 0.76
CDKL1Q00532 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL1Q00532 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL1Q00532 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL1Q00532 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.77■□□□□ 0.76
CDKL1Q00532 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL1Q00532 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDKL1Q00532 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDKL1Q00532 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
CDKL1Q00532 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.76■□□□□ 0.75
CDKL1Q00532 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL1Q00532 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.76■□□□□ 0.75
CDKL1Q00532 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CDKL1Q00532 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.76■□□□□ 0.75
CDKL1Q00532 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL1Q00532 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL1Q00532 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL1Q00532 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL1Q00532 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL1Q00532 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDKL1Q00532 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL1Q00532 CYP2T1P-201ENST00000432607 1285 ntBASIC19.76■□□□□ 0.75
CDKL1Q00532 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.76■□□□□ 0.75
CDKL1Q00532 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.76■□□□□ 0.75
CDKL1Q00532 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDKL1Q00532 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CDKL1Q00532 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.75■□□□□ 0.75
CDKL1Q00532 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.75■□□□□ 0.75
CDKL1Q00532 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL1Q00532 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.75■□□□□ 0.75
CDKL1Q00532 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDKL1Q00532 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL1Q00532 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL1Q00532 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.75■□□□□ 0.75
CDKL1Q00532 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL1Q00532 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.75■□□□□ 0.75
CDKL1Q00532 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL1Q00532 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CDKL1Q00532 AC092437.1-201ENST00000624794 1048 ntBASIC19.75■□□□□ 0.75
CDKL1Q00532 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.75■□□□□ 0.75
CDKL1Q00532 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.75■□□□□ 0.75
CDKL1Q00532 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CDKL1Q00532 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL1Q00532 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.75■□□□□ 0.75
CDKL1Q00532 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL1Q00532 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL1Q00532 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL1Q00532 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL1Q00532 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CDKL1Q00532 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDKL1Q00532 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL1Q00532 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL1Q00532 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL1Q00532 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.74■□□□□ 0.75
CDKL1Q00532 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL1Q00532 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL1Q00532 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL1Q00532 MIR935-201ENST00000401179 91 ntBASIC19.74■□□□□ 0.75
CDKL1Q00532 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.74■□□□□ 0.75
CDKL1Q00532 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL1Q00532 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL1Q00532 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.74■□□□□ 0.75
CDKL1Q00532 OR10C1-204ENST00000622521 1039 ntBASIC19.74■□□□□ 0.75
CDKL1Q00532 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL1Q00532 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL1Q00532 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.74■□□□□ 0.75
CDKL1Q00532 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL1Q00532 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.74■□□□□ 0.75
CDKL1Q00532 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CDKL1Q00532 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDKL1Q00532 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL1Q00532 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL1Q00532 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL1Q00532 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL1Q00532 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CDKL1Q00532 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL1Q00532 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL1Q00532 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.73■□□□□ 0.75
CDKL1Q00532 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms