Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEC61A1P61619 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEC61A1P61619 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.54■□□□□ 0.4
SEC61A1P61619 ID1-201ENST00000376105 1233 ntBASIC17.54■□□□□ 0.4
SEC61A1P61619 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.54■□□□□ 0.4
SEC61A1P61619 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.54■□□□□ 0.4
SEC61A1P61619 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SEC61A1P61619 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.54■□□□□ 0.4
SEC61A1P61619 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.54■□□□□ 0.4
SEC61A1P61619 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.54■□□□□ 0.4
SEC61A1P61619 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SEC61A1P61619 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEC61A1P61619 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEC61A1P61619 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SEC61A1P61619 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEC61A1P61619 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEC61A1P61619 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.54■□□□□ 0.4
SEC61A1P61619 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEC61A1P61619 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEC61A1P61619 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SEC61A1P61619 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61A1P61619 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61A1P61619 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.53■□□□□ 0.4
SEC61A1P61619 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SEC61A1P61619 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61A1P61619 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SEC61A1P61619 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.53■□□□□ 0.4
SEC61A1P61619 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.53■□□□□ 0.4
SEC61A1P61619 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61A1P61619 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.53■□□□□ 0.4
SEC61A1P61619 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61A1P61619 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SEC61A1P61619 HLA-L-209ENST00000420110 1011 ntBASIC17.53■□□□□ 0.4
SEC61A1P61619 AC006970.2-201ENST00000450065 779 ntBASIC17.53■□□□□ 0.4
SEC61A1P61619 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.53■□□□□ 0.4
SEC61A1P61619 KRT18P20-201ENST00000548986 1279 ntBASIC17.53■□□□□ 0.4
SEC61A1P61619 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.53■□□□□ 0.4
SEC61A1P61619 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.53■□□□□ 0.4
SEC61A1P61619 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.53■□□□□ 0.4
SEC61A1P61619 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.53■□□□□ 0.4
SEC61A1P61619 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61A1P61619 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61A1P61619 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61A1P61619 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61A1P61619 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61A1P61619 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61A1P61619 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61A1P61619 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61A1P61619 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.53■□□□□ 0.4
SEC61A1P61619 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61A1P61619 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SEC61A1P61619 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SEC61A1P61619 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SEC61A1P61619 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SEC61A1P61619 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SEC61A1P61619 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SEC61A1P61619 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SEC61A1P61619 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SEC61A1P61619 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SEC61A1P61619 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SEC61A1P61619 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SEC61A1P61619 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.52■□□□□ 0.4
SEC61A1P61619 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SEC61A1P61619 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.52■□□□□ 0.4
SEC61A1P61619 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SEC61A1P61619 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.52■□□□□ 0.4
SEC61A1P61619 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SEC61A1P61619 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SEC61A1P61619 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SEC61A1P61619 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SEC61A1P61619 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SEC61A1P61619 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SEC61A1P61619 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC61A1P61619 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SEC61A1P61619 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SEC61A1P61619 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SEC61A1P61619 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.51■□□□□ 0.39
SEC61A1P61619 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SEC61A1P61619 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC61A1P61619 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SEC61A1P61619 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC61A1P61619 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC61A1P61619 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SEC61A1P61619 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SEC61A1P61619 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.51■□□□□ 0.39
SEC61A1P61619 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.51■□□□□ 0.39
SEC61A1P61619 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.51■□□□□ 0.39
SEC61A1P61619 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.51■□□□□ 0.39
SEC61A1P61619 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SEC61A1P61619 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.51■□□□□ 0.39
SEC61A1P61619 AC061975.6-201ENST00000579045 1553 ntBASIC17.51■□□□□ 0.39
SEC61A1P61619 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
SEC61A1P61619 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SEC61A1P61619 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.51■□□□□ 0.39
SEC61A1P61619 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SEC61A1P61619 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.51■□□□□ 0.39
SEC61A1P61619 AC010536.3-201ENST00000620306 533 ntBASIC17.51■□□□□ 0.39
SEC61A1P61619 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
SEC61A1P61619 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC61A1P61619 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms