Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRP54P61011 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRP54P61011 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.86■□□□□ 0.77
SRP54P61011 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SRP54P61011 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.86■□□□□ 0.77
SRP54P61011 RPS2P4-201ENST00000476944 856 ntBASIC19.86■□□□□ 0.77
SRP54P61011 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.86■□□□□ 0.77
SRP54P61011 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.86■□□□□ 0.77
SRP54P61011 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.86■□□□□ 0.77
SRP54P61011 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.86■□□□□ 0.77
SRP54P61011 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.86■□□□□ 0.77
SRP54P61011 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.86■□□□□ 0.77
SRP54P61011 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.86■□□□□ 0.77
SRP54P61011 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.86■□□□□ 0.77
SRP54P61011 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRP54P61011 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.86■□□□□ 0.77
SRP54P61011 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRP54P61011 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRP54P61011 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRP54P61011 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRP54P61011 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRP54P61011 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SRP54P61011 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.85■□□□□ 0.77
SRP54P61011 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.85■□□□□ 0.77
SRP54P61011 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.85■□□□□ 0.77
SRP54P61011 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SRP54P61011 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SRP54P61011 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.85■□□□□ 0.77
SRP54P61011 AC023632.3-201ENST00000521633 145 ntBASIC19.85■□□□□ 0.77
SRP54P61011 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.85■□□□□ 0.77
SRP54P61011 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.85■□□□□ 0.77
SRP54P61011 MTDHP1-201ENST00000605323 784 ntBASIC19.85■□□□□ 0.77
SRP54P61011 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.85■□□□□ 0.77
SRP54P61011 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.85■□□□□ 0.77
SRP54P61011 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRP54P61011 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRP54P61011 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRP54P61011 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRP54P61011 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.84■□□□□ 0.77
SRP54P61011 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SRP54P61011 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.84■□□□□ 0.77
SRP54P61011 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRP54P61011 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SRP54P61011 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.84■□□□□ 0.77
SRP54P61011 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.84■□□□□ 0.77
SRP54P61011 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.84■□□□□ 0.77
SRP54P61011 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.84■□□□□ 0.77
SRP54P61011 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.84■□□□□ 0.77
SRP54P61011 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.84■□□□□ 0.77
SRP54P61011 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SRP54P61011 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.84■□□□□ 0.77
SRP54P61011 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.84■□□□□ 0.77
SRP54P61011 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.84■□□□□ 0.77
SRP54P61011 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRP54P61011 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SRP54P61011 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.84■□□□□ 0.77
SRP54P61011 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRP54P61011 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRP54P61011 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SRP54P61011 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SRP54P61011 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.83■□□□□ 0.77
SRP54P61011 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.83■□□□□ 0.77
SRP54P61011 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.83■□□□□ 0.77
SRP54P61011 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SRP54P61011 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SRP54P61011 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SRP54P61011 AC008550.1-201ENST00000511500 884 ntBASIC19.83■□□□□ 0.77
SRP54P61011 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.83■□□□□ 0.77
SRP54P61011 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.83■□□□□ 0.77
SRP54P61011 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.83■□□□□ 0.76
SRP54P61011 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SRP54P61011 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
SRP54P61011 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SRP54P61011 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SRP54P61011 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.83■□□□□ 0.76
SRP54P61011 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.83■□□□□ 0.76
SRP54P61011 AC026310.3-201ENST00000625186 2373 ntBASIC19.83■□□□□ 0.76
SRP54P61011 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SRP54P61011 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SRP54P61011 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRP54P61011 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRP54P61011 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms