Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN6P56747 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN6P56747 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CLDN6P56747 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN6P56747 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLDN6P56747 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN6P56747 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN6P56747 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CLDN6P56747 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN6P56747 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN6P56747 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN6P56747 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN6P56747 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN6P56747 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN6P56747 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN6P56747 MIR1238-201ENST00000408483 83 ntBASIC19.38■□□□□ 0.69
CLDN6P56747 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.38■□□□□ 0.69
CLDN6P56747 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN6P56747 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.38■□□□□ 0.69
CLDN6P56747 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN6P56747 AC005363.2-201ENST00000618631 242 ntBASIC19.38■□□□□ 0.69
CLDN6P56747 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN6P56747 AC092865.7-201ENST00000641832 219 ntBASIC19.38■□□□□ 0.69
CLDN6P56747 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLDN6P56747 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CLDN6P56747 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CLDN6P56747 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLDN6P56747 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN6P56747 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN6P56747 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN6P56747 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN6P56747 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN6P56747 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CLDN6P56747 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CLDN6P56747 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN6P56747 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN6P56747 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN6P56747 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN6P56747 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN6P56747 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.37■□□□□ 0.69
CLDN6P56747 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN6P56747 KRT16P5-201ENST00000455284 522 ntBASIC19.37■□□□□ 0.69
CLDN6P56747 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN6P56747 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN6P56747 AC145285.6-201ENST00000604632 637 ntBASIC19.37■□□□□ 0.69
CLDN6P56747 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN6P56747 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN6P56747 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN6P56747 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN6P56747 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CLDN6P56747 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN6P56747 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CLDN6P56747 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN6P56747 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.36■□□□□ 0.69
CLDN6P56747 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN6P56747 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN6P56747 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.36■□□□□ 0.69
CLDN6P56747 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLDN6P56747 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN6P56747 REXO1L10P-201ENST00000615707 1290 ntBASIC19.36■□□□□ 0.69
CLDN6P56747 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN6P56747 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN6P56747 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN6P56747 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CLDN6P56747 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN6P56747 CYP2D8P-201ENST00000433633 1490 ntBASIC19.35■□□□□ 0.69
CLDN6P56747 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN6P56747 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLDN6P56747 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.35■□□□□ 0.69
CLDN6P56747 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN6P56747 LINC00565-201ENST00000562710 2331 ntBASIC19.35■□□□□ 0.69
CLDN6P56747 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN6P56747 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN6P56747 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN6P56747 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN6P56747 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN6P56747 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN6P56747 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN6P56747 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN6P56747 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.35■□□□□ 0.69
CLDN6P56747 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.35■□□□□ 0.69
CLDN6P56747 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.35■□□□□ 0.69
CLDN6P56747 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLDN6P56747 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.35■□□□□ 0.69
CLDN6P56747 AL121829.2-201ENST00000620908 328 ntBASIC19.35■□□□□ 0.69
CLDN6P56747 AL590326.2-201ENST00000625139 305 ntBASIC19.35■□□□□ 0.69
CLDN6P56747 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN6P56747 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.35■□□□□ 0.69
CLDN6P56747 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN6P56747 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN6P56747 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN6P56747 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLDN6P56747 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN6P56747 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN6P56747 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN6P56747 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN6P56747 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CLDN6P56747 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.34■□□□□ 0.69
CLDN6P56747 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN6P56747 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms