Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.01□□□□□ -0.01
CMC4P56277 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CMC4P56277 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CMC4P56277 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CMC4P56277 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15□□□□□ -0.01
CMC4P56277 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15□□□□□ -0.01
CMC4P56277 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CMC4P56277 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15□□□□□ -0.01
CMC4P56277 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CMC4P56277 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15□□□□□ -0.01
CMC4P56277 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CMC4P56277 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CMC4P56277 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CMC4P56277 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15□□□□□ -0.01
CMC4P56277 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CMC4P56277 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CMC4P56277 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
CMC4P56277 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15□□□□□ -0.01
CMC4P56277 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
CMC4P56277 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CMC4P56277 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CMC4P56277 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CMC4P56277 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15□□□□□ -0.01
CMC4P56277 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15□□□□□ -0.01
CMC4P56277 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15□□□□□ -0.01
CMC4P56277 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CMC4P56277 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CMC4P56277 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CMC4P56277 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CMC4P56277 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.99□□□□□ -0.01
CMC4P56277 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CMC4P56277 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CMC4P56277 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CMC4P56277 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CMC4P56277 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CMC4P56277 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CMC4P56277 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CMC4P56277 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.99□□□□□ -0.01
CMC4P56277 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CMC4P56277 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.99□□□□□ -0.01
CMC4P56277 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CMC4P56277 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.99□□□□□ -0.01
CMC4P56277 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.99□□□□□ -0.01
CMC4P56277 KRT18P6-201ENST00000555540 1265 ntBASIC14.99□□□□□ -0.01
CMC4P56277 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.99□□□□□ -0.01
CMC4P56277 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.99□□□□□ -0.01
CMC4P56277 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CMC4P56277 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.99□□□□□ -0.01
CMC4P56277 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.99□□□□□ -0.01
CMC4P56277 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CMC4P56277 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC14.99□□□□□ -0.01
CMC4P56277 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CMC4P56277 AC007375.3-201ENST00000600936 2314 ntBASIC14.99□□□□□ -0.01
CMC4P56277 KRT16P6-202ENST00000425692 1426 ntBASIC14.99□□□□□ -0.01
CMC4P56277 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CMC4P56277 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CMC4P56277 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.99□□□□□ -0.01
CMC4P56277 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.99□□□□□ -0.01
CMC4P56277 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.99□□□□□ -0.01
CMC4P56277 AC092368.3-202ENST00000574180 1591 ntBASIC14.98□□□□□ -0.01
CMC4P56277 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.98□□□□□ -0.01
CMC4P56277 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CMC4P56277 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CMC4P56277 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.98□□□□□ -0.01
CMC4P56277 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CMC4P56277 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CMC4P56277 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CMC4P56277 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CMC4P56277 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CMC4P56277 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CMC4P56277 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CMC4P56277 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.98□□□□□ -0.01
CMC4P56277 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.98□□□□□ -0.01
CMC4P56277 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.98□□□□□ -0.01
CMC4P56277 AC005829.2-201ENST00000571422 1056 ntBASIC14.98□□□□□ -0.01
CMC4P56277 AL031963.3-201ENST00000606441 850 ntBASIC14.98□□□□□ -0.01
CMC4P56277 KRT8P17-201ENST00000453110 1448 ntBASIC14.98□□□□□ -0.01
CMC4P56277 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CMC4P56277 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CMC4P56277 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.97□□□□□ -0.01
CMC4P56277 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CMC4P56277 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.97□□□□□ -0.01
CMC4P56277 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CMC4P56277 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CMC4P56277 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CMC4P56277 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.97□□□□□ -0.01
CMC4P56277 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CMC4P56277 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CMC4P56277 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CMC4P56277 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.97□□□□□ -0.01
CMC4P56277 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CMC4P56277 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.97□□□□□ -0.01
CMC4P56277 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.97□□□□□ -0.01
CMC4P56277 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.97□□□□□ -0.01
CMC4P56277 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.97□□□□□ -0.01
CMC4P56277 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CMC4P56277 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CMC4P56277 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.97□□□□□ -0.01
CMC4P56277 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.97□□□□□ -0.01
CMC4P56277 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms