Protein–RNA interactions for Protein: P53867

ATG4, Cysteine protease ATG4, yeastyeast

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG4P53867 snR52snR52 92 nt2.14□□□□□ -2.07
ATG4P53867 STE11YLR362W 2154 nt2.14□□□□□ -2.07
ATG4P53867 SPO75YLL005C 2607 nt2.14□□□□□ -2.07
ATG4P53867 YMR045CYMR045C 5268 nt2.14□□□□□ -2.07
ATG4P53867 PHO91YNR013C 2685 nt2.14□□□□□ -2.07
ATG4P53867 CHC1YGL206C 4962 nt2.13□□□□□ -2.07
ATG4P53867 MNE1YOR350C 1992 nt2.13□□□□□ -2.07
ATG4P53867 YDR003W-AYDR003W-A 123 nt2.13□□□□□ -2.07
ATG4P53867 TIM9YEL020W-A 264 nt2.13□□□□□ -2.07
ATG4P53867 SPF1YEL031W 3648 nt2.13□□□□□ -2.07
ATG4P53867 MSB1YOR188W 3414 nt2.12□□□□□ -2.07
ATG4P53867 KOG1YHR186C 4674 nt2.12□□□□□ -2.07
ATG4P53867 SPO21YOL091W 1830 nt2.12□□□□□ -2.07
ATG4P53867 ULI1YFR026C 510 nt2.11□□□□□ -2.07
ATG4P53867 ECM12YHR021W-A 456 nt2.11□□□□□ -2.07
ATG4P53867 ZRG17YNR039C 1818 nt2.11□□□□□ -2.07
ATG4P53867 MSC6YOR354C 2079 nt2.11□□□□□ -2.07
ATG4P53867 YOR343W-BYOR343W-B 5313 nt2.11□□□□□ -2.07
ATG4P53867 MCM10YIL150C 1716 nt2.11□□□□□ -2.07
ATG4P53867 LRE1YCL051W 1752 nt2.1□□□□□ -2.07
ATG4P53867 NUP100YKL068W 2880 nt2.1□□□□□ -2.07
ATG4P53867 YDR182W-AYDR182W-A 204 nt2.1□□□□□ -2.07
ATG4P53867 RPS17AYML024W 411 nt2.1□□□□□ -2.07
ATG4P53867 USO1YDL058W 5373 nt2.1□□□□□ -2.07
ATG4P53867 ARP8YOR141C 2646 nt2.1□□□□□ -2.07
ATG4P53867 SMC6YLR383W 3345 nt2.09□□□□□ -2.07
ATG4P53867 RPL34BYIL052C 366 nt2.09□□□□□ -2.07
ATG4P53867 RLM1YPL089C 2031 nt2.08□□□□□ -2.08
ATG4P53867 NOP14YDL148C 2433 nt2.08□□□□□ -2.08
ATG4P53867 YJL120WYJL120W 324 nt2.08□□□□□ -2.08
ATG4P53867 ATP7YKL016C 525 nt2.08□□□□□ -2.08
ATG4P53867 BPH1YCR032W 6504 nt2.08□□□□□ -2.08
ATG4P53867 HSL1YKL101W 4557 nt2.08□□□□□ -2.08
ATG4P53867 CAT2YML042W 2013 nt2.08□□□□□ -2.08
ATG4P53867 YPR097WYPR097W 3222 nt2.07□□□□□ -2.08
ATG4P53867 NUP170YBL079W 4509 nt2.07□□□□□ -2.08
ATG4P53867 YGR164WYGR164W 336 nt2.07□□□□□ -2.08
ATG4P53867 YMR242W-AYMR242W-A 90 nt2.07□□□□□ -2.08
ATG4P53867 YOR345CYOR345C 351 nt2.07□□□□□ -2.08
ATG4P53867 YBR174CYBR174C 315 nt2.07□□□□□ -2.08
ATG4P53867 MET18YIL128W 3099 nt2.07□□□□□ -2.08
ATG4P53867 STH1YIL126W 4080 nt2.07□□□□□ -2.08
ATG4P53867 PUT3YKL015W 2940 nt2.07□□□□□ -2.08
ATG4P53867 HSH155YMR288W 2916 nt2.06□□□□□ -2.08
ATG4P53867 ELG1YOR144C 2376 nt2.06□□□□□ -2.08
ATG4P53867 YCR102W-AYCR102W-A 198 nt2.06□□□□□ -2.08
ATG4P53867 COF1YLL050C 432 nt2.06□□□□□ -2.08
ATG4P53867 YLR154W-AYLR154W-A 186 nt2.06□□□□□ -2.08
ATG4P53867 RPS25BYLR333C 327 nt2.06□□□□□ -2.08
ATG4P53867 VPS13YLL040C 9435 nt2.05□□□□□ -2.08
ATG4P53867 MLH1YMR167W 2310 nt2.05□□□□□ -2.08
ATG4P53867 UBP1YDL122W 2430 nt2.05□□□□□ -2.08
ATG4P53867 YOR072W-BYOR072W-B 162 nt2.05□□□□□ -2.08
ATG4P53867 YOR381W-AYOR381W-A 168 nt2.05□□□□□ -2.08
ATG4P53867 ZIP1YDR285W 2628 nt2.05□□□□□ -2.08
ATG4P53867 ZIP2YGL249W 2115 nt2.05□□□□□ -2.08
ATG4P53867 ENV11YGR071C 2583 nt2.04□□□□□ -2.08
ATG4P53867 NAM7YMR080C 2916 nt2.04□□□□□ -2.08
ATG4P53867 SCD5YOR329C 2619 nt2.04□□□□□ -2.08
ATG4P53867 MMS22YLR320W 4365 nt2.04□□□□□ -2.08
ATG4P53867 RAD34YDR314C 2079 nt2.03□□□□□ -2.08
ATG4P53867 TFC8YPL007C 1767 nt2.03□□□□□ -2.08
ATG4P53867 YNL205CYNL205C 423 nt2.03□□□□□ -2.08
ATG4P53867 NOC3YLR002C 1992 nt2.03□□□□□ -2.08
ATG4P53867 SAS3YBL052C 2496 nt2.02□□□□□ -2.09
ATG4P53867 YOL098CYOL098C 3114 nt2.02□□□□□ -2.09
ATG4P53867 ATG11YPR049C 3537 nt2.02□□□□□ -2.09
ATG4P53867 TUS1YLR425W 3924 nt2.02□□□□□ -2.09
ATG4P53867 PMP1YCR024C-A 123 nt2.02□□□□□ -2.09
ATG4P53867 PAU3YCR104W 375 nt2.02□□□□□ -2.09
ATG4P53867 RPL31AYDL075W 342 nt2.02□□□□□ -2.09
ATG4P53867 RPL33BYOR234C 324 nt2.02□□□□□ -2.09
ATG4P53867 DCP2YNL118C 2913 nt2.02□□□□□ -2.09
ATG4P53867 CUL3YGR003W 2235 nt2.02□□□□□ -2.09
ATG4P53867 SAP190YKR028W 3102 nt2.01□□□□□ -2.09
ATG4P53867 VPS8YAL002W 3825 nt2.01□□□□□ -2.09
ATG4P53867 TRL1YJL087C 2484 nt2.01□□□□□ -2.09
ATG4P53867 MAD1YGL086W 2250 nt2.01□□□□□ -2.09
ATG4P53867 SIR4YDR227W 4077 nt2.01□□□□□ -2.09
ATG4P53867 YDR341CYDR341C 1824 nt2.01□□□□□ -2.09
ATG4P53867 RGA1YOR127W 3024 nt2□□□□□ -2.09
ATG4P53867 YLL019W-AYLL019W-A 93 nt2□□□□□ -2.09
ATG4P53867 SEC16YPL085W 6588 nt1.99□□□□□ -2.09
ATG4P53867 YDL196WYDL196W 330 nt1.99□□□□□ -2.09
ATG4P53867 YIR044CYIR044C 186 nt1.99□□□□□ -2.09
ATG4P53867 YBL053WYBL053W 375 nt1.99□□□□□ -2.09
ATG4P53867 YOR108C-AYOR108C-A 210 nt1.99□□□□□ -2.09
ATG4P53867 APL2YKL135C 2181 nt1.99□□□□□ -2.09
ATG4P53867 YEL073CYEL073C 324 nt1.98□□□□□ -2.09
ATG4P53867 YIL020C-AYIL020C-A 339 nt1.98□□□□□ -2.09
ATG4P53867 YOR161W-BYOR161W-B 261 nt1.98□□□□□ -2.09
ATG4P53867 COY1YKL179C 2040 nt1.98□□□□□ -2.09
ATG4P53867 MAK10YEL053C 2202 nt1.98□□□□□ -2.09
ATG4P53867 MSH5YDL154W 2706 nt1.97□□□□□ -2.09
ATG4P53867 SVL3YPL032C 2478 nt1.97□□□□□ -2.09
ATG4P53867 BRP1YGL007W 378 nt1.97□□□□□ -2.09
ATG4P53867 snR48snR48 113 nt1.97□□□□□ -2.09
ATG4P53867 CDC60YPL160W 3273 nt1.97□□□□□ -2.09
ATG4P53867 SYH1YPL105C 2550 nt1.96□□□□□ -2.1
ATG4P53867 snR85snR85 171 nt1.96□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 32.7 ms