Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC25A1P53007 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC25A1P53007 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC25A1P53007 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC25A1P53007 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC25A1P53007 KRT18P11-201ENST00000435214 1283 ntBASIC17.88■□□□□ 0.45
SLC25A1P53007 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC25A1P53007 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC25A1P53007 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC25A1P53007 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC25A1P53007 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC25A1P53007 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC25A1P53007 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SLC25A1P53007 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC25A1P53007 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC25A1P53007 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC25A1P53007 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC25A1P53007 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC25A1P53007 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC25A1P53007 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC25A1P53007 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC25A1P53007 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SLC25A1P53007 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC25A1P53007 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC25A1P53007 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC25A1P53007 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC25A1P53007 AC034268.1-201ENST00000441047 882 ntBASIC17.87■□□□□ 0.45
SLC25A1P53007 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.87■□□□□ 0.45
SLC25A1P53007 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC25A1P53007 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SLC25A1P53007 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC25A1P53007 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC25A1P53007 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC25A1P53007 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC25A1P53007 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC25A1P53007 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC25A1P53007 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SLC25A1P53007 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SLC25A1P53007 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC25A1P53007 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC25A1P53007 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC25A1P53007 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SLC25A1P53007 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC25A1P53007 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC25A1P53007 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC25A1P53007 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC25A1P53007 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC25A1P53007 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC25A1P53007 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC25A1P53007 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC25A1P53007 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC25A1P53007 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SLC25A1P53007 AL158211.5-201ENST00000623583 2518 ntBASIC17.86■□□□□ 0.45
SLC25A1P53007 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC25A1P53007 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
SLC25A1P53007 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC25A1P53007 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC25A1P53007 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC25A1P53007 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SLC25A1P53007 AC016405.3-201ENST00000607710 860 ntBASIC17.86■□□□□ 0.45
SLC25A1P53007 AC100791.3-201ENST00000617619 330 ntBASIC17.86■□□□□ 0.45
SLC25A1P53007 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SLC25A1P53007 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC25A1P53007 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC25A1P53007 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.86■□□□□ 0.45
SLC25A1P53007 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC25A1P53007 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC25A1P53007 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC25A1P53007 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SLC25A1P53007 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC25A1P53007 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC25A1P53007 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SLC25A1P53007 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC25A1P53007 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC25A1P53007 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.85■□□□□ 0.45
SLC25A1P53007 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC25A1P53007 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC25A1P53007 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC25A1P53007 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC25A1P53007 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC25A1P53007 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.85■□□□□ 0.45
SLC25A1P53007 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.85■□□□□ 0.45
SLC25A1P53007 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.85■□□□□ 0.45
SLC25A1P53007 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SLC25A1P53007 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC25A1P53007 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC25A1P53007 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC25A1P53007 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SLC25A1P53007 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC25A1P53007 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SLC25A1P53007 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC25A1P53007 PTBP1P-201ENST00000554374 1601 ntBASIC17.84■□□□□ 0.45
SLC25A1P53007 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC25A1P53007 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC25A1P53007 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC25A1P53007 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC25A1P53007 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC25A1P53007 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.84■□□□□ 0.45
SLC25A1P53007 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC25A1P53007 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms