Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGA2P52926 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGA2P52926 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGA2P52926 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGA2P52926 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGA2P52926 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGA2P52926 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGA2P52926 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGA2P52926 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGA2P52926 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGA2P52926 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGA2P52926 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HMGA2P52926 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGA2P52926 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGA2P52926 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.37■□□□□ 0.53
HMGA2P52926 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGA2P52926 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGA2P52926 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.37■□□□□ 0.53
HMGA2P52926 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGA2P52926 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.37■□□□□ 0.53
HMGA2P52926 AL356652.1-201ENST00000615962 565 ntBASIC18.37■□□□□ 0.53
HMGA2P52926 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGA2P52926 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HMGA2P52926 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HMGA2P52926 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGA2P52926 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGA2P52926 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGA2P52926 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGA2P52926 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
HMGA2P52926 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.37■□□□□ 0.53
HMGA2P52926 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGA2P52926 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGA2P52926 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGA2P52926 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HMGA2P52926 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGA2P52926 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HMGA2P52926 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGA2P52926 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGA2P52926 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGA2P52926 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGA2P52926 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGA2P52926 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGA2P52926 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGA2P52926 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGA2P52926 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGA2P52926 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGA2P52926 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.36■□□□□ 0.53
HMGA2P52926 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.36■□□□□ 0.53
HMGA2P52926 AC087633.2-202ENST00000565166 1439 ntBASIC18.36■□□□□ 0.53
HMGA2P52926 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGA2P52926 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGA2P52926 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGA2P52926 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HMGA2P52926 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGA2P52926 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGA2P52926 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HMGA2P52926 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGA2P52926 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGA2P52926 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGA2P52926 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGA2P52926 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGA2P52926 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGA2P52926 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.35■□□□□ 0.53
HMGA2P52926 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGA2P52926 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGA2P52926 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGA2P52926 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGA2P52926 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
HMGA2P52926 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.35■□□□□ 0.53
HMGA2P52926 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HMGA2P52926 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGA2P52926 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HMGA2P52926 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGA2P52926 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HMGA2P52926 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGA2P52926 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGA2P52926 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HMGA2P52926 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
HMGA2P52926 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGA2P52926 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
HMGA2P52926 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.34■□□□□ 0.53
HMGA2P52926 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.34■□□□□ 0.53
HMGA2P52926 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.34■□□□□ 0.53
HMGA2P52926 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HMGA2P52926 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGA2P52926 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGA2P52926 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms