Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFNA3P52797 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EFNA3P52797 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFNA3P52797 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFNA3P52797 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
EFNA3P52797 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.87■□□□□ 0.61
EFNA3P52797 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EFNA3P52797 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFNA3P52797 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.87■□□□□ 0.61
EFNA3P52797 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
EFNA3P52797 AC069544.1-201ENST00000609399 999 ntBASIC18.87■□□□□ 0.61
EFNA3P52797 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.87■□□□□ 0.61
EFNA3P52797 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.87■□□□□ 0.61
EFNA3P52797 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.87■□□□□ 0.61
EFNA3P52797 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFNA3P52797 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNA3P52797 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNA3P52797 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.86■□□□□ 0.61
EFNA3P52797 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
EFNA3P52797 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.86■□□□□ 0.61
EFNA3P52797 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.86■□□□□ 0.61
EFNA3P52797 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFNA3P52797 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNA3P52797 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.86■□□□□ 0.61
EFNA3P52797 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.86■□□□□ 0.61
EFNA3P52797 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.86■□□□□ 0.61
EFNA3P52797 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNA3P52797 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFNA3P52797 POM121L13P-201ENST00000422362 380 ntBASIC18.86■□□□□ 0.61
EFNA3P52797 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
EFNA3P52797 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFNA3P52797 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.86■□□□□ 0.61
EFNA3P52797 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.86■□□□□ 0.61
EFNA3P52797 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFNA3P52797 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
EFNA3P52797 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNA3P52797 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNA3P52797 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.86■□□□□ 0.61
EFNA3P52797 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNA3P52797 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
EFNA3P52797 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNA3P52797 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
EFNA3P52797 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFNA3P52797 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.86■□□□□ 0.61
EFNA3P52797 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
EFNA3P52797 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.85■□□□□ 0.61
EFNA3P52797 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
EFNA3P52797 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
EFNA3P52797 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFNA3P52797 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EFNA3P52797 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
EFNA3P52797 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFNA3P52797 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFNA3P52797 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EFNA3P52797 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EFNA3P52797 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFNA3P52797 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.85■□□□□ 0.61
EFNA3P52797 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
EFNA3P52797 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
EFNA3P52797 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
EFNA3P52797 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EFNA3P52797 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.85■□□□□ 0.61
EFNA3P52797 AC120498.8-201ENST00000614275 531 ntBASIC18.85■□□□□ 0.61
EFNA3P52797 AC124283.5-201ENST00000624661 1809 ntBASIC18.85■□□□□ 0.61
EFNA3P52797 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EFNA3P52797 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.85■□□□□ 0.61
EFNA3P52797 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
EFNA3P52797 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.84■□□□□ 0.61
EFNA3P52797 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.84■□□□□ 0.61
EFNA3P52797 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
EFNA3P52797 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.84■□□□□ 0.61
EFNA3P52797 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
EFNA3P52797 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.84■□□□□ 0.61
EFNA3P52797 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.84■□□□□ 0.61
EFNA3P52797 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNA3P52797 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EFNA3P52797 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.83■□□□□ 0.61
EFNA3P52797 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.83■□□□□ 0.61
EFNA3P52797 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.83■□□□□ 0.61
EFNA3P52797 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
EFNA3P52797 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
EFNA3P52797 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
EFNA3P52797 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EFNA3P52797 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
EFNA3P52797 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms