Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.8■□□□□ 0.6
SMSP52788 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMSP52788 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.8■□□□□ 0.6
SMSP52788 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SMSP52788 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.8■□□□□ 0.6
SMSP52788 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMSP52788 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMSP52788 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMSP52788 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMSP52788 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMSP52788 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMSP52788 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.79■□□□□ 0.6
SMSP52788 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.79■□□□□ 0.6
SMSP52788 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SMSP52788 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 PRORSD1P-201ENST00000295112 541 ntBASIC18.79■□□□□ 0.6
SMSP52788 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.79■□□□□ 0.6
SMSP52788 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMSP52788 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SMSP52788 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.79■□□□□ 0.6
SMSP52788 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.79■□□□□ 0.6
SMSP52788 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SMSP52788 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 FP700111.2-201ENST00000619190 1892 ntBASIC18.79■□□□□ 0.6
SMSP52788 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.79■□□□□ 0.6
SMSP52788 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMSP52788 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMSP52788 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMSP52788 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMSP52788 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMSP52788 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.78■□□□□ 0.6
SMSP52788 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.78■□□□□ 0.6
SMSP52788 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMSP52788 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMSP52788 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMSP52788 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SMSP52788 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMSP52788 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMSP52788 POU5F1P4-201ENST00000413175 1085 ntBASIC18.78■□□□□ 0.6
SMSP52788 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.78■□□□□ 0.6
SMSP52788 RARRES2P4-201ENST00000514074 484 ntBASIC18.78■□□□□ 0.6
SMSP52788 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.78■□□□□ 0.6
SMSP52788 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMSP52788 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMSP52788 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMSP52788 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMSP52788 PCDHAC2-203ENST00000615316 3011 ntBASIC18.78■□□□□ 0.6
SMSP52788 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.78■□□□□ 0.6
SMSP52788 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SMSP52788 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMSP52788 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.77■□□□□ 0.6
SMSP52788 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMSP52788 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.77■□□□□ 0.6
SMSP52788 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMSP52788 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMSP52788 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.77■□□□□ 0.6
SMSP52788 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMSP52788 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SMSP52788 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SMSP52788 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
SMSP52788 AC093787.1-201ENST00000450396 207 ntBASIC18.77■□□□□ 0.6
SMSP52788 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.77■□□□□ 0.6
SMSP52788 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.77■□□□□ 0.6
SMSP52788 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SMSP52788 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMSP52788 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMSP52788 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMSP52788 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMSP52788 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMSP52788 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMSP52788 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.77■□□□□ 0.59
SMSP52788 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMSP52788 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SMSP52788 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SMSP52788 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMSP52788 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMSP52788 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.76■□□□□ 0.59
SMSP52788 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMSP52788 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.76■□□□□ 0.59
SMSP52788 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMSP52788 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMSP52788 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMSP52788 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMSP52788 AC007952.6-201ENST00000573168 2673 ntBASIC18.76■□□□□ 0.59
SMSP52788 AC003957.1-201ENST00000625108 2673 ntBASIC18.76■□□□□ 0.59
SMSP52788 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.76■□□□□ 0.59
SMSP52788 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms