Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
NEK4P51957 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NEK4P51957 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NEK4P51957 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
NEK4P51957 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.96■■□□□ 1.43
NEK4P51957 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.96■■□□□ 1.43
NEK4P51957 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.96■■□□□ 1.43
NEK4P51957 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.96■■□□□ 1.43
NEK4P51957 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.96■■□□□ 1.43
NEK4P51957 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.96■■□□□ 1.43
NEK4P51957 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.96■■□□□ 1.43
NEK4P51957 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.95■■□□□ 1.43
NEK4P51957 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.95■■□□□ 1.43
NEK4P51957 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
NEK4P51957 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
NEK4P51957 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
NEK4P51957 CYP21A1P-202ENST00000354927 1481 ntBASIC23.95■■□□□ 1.42
NEK4P51957 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
NEK4P51957 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.95■■□□□ 1.42
NEK4P51957 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
NEK4P51957 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NEK4P51957 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.95■■□□□ 1.42
NEK4P51957 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.95■■□□□ 1.42
NEK4P51957 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.95■■□□□ 1.42
NEK4P51957 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
NEK4P51957 AC016405.3-201ENST00000607710 860 ntBASIC23.95■■□□□ 1.42
NEK4P51957 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
NEK4P51957 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
NEK4P51957 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
NEK4P51957 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.94■■□□□ 1.42
NEK4P51957 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NEK4P51957 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.94■■□□□ 1.42
NEK4P51957 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NEK4P51957 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NEK4P51957 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.94■■□□□ 1.42
NEK4P51957 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.94■■□□□ 1.42
NEK4P51957 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
NEK4P51957 AC087623.3-201ENST00000607047 1098 ntBASIC23.94■■□□□ 1.42
NEK4P51957 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.94■■□□□ 1.42
NEK4P51957 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NEK4P51957 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NEK4P51957 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NEK4P51957 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NEK4P51957 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NEK4P51957 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NEK4P51957 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NEK4P51957 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NEK4P51957 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
NEK4P51957 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
NEK4P51957 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.93■■□□□ 1.42
NEK4P51957 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NEK4P51957 PGM5P4-201ENST00000421970 445 ntBASIC23.93■■□□□ 1.42
NEK4P51957 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NEK4P51957 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NEK4P51957 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NEK4P51957 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.93■■□□□ 1.42
NEK4P51957 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.93■■□□□ 1.42
NEK4P51957 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NEK4P51957 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.93■■□□□ 1.42
NEK4P51957 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.93■■□□□ 1.42
NEK4P51957 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NEK4P51957 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NEK4P51957 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NEK4P51957 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NEK4P51957 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NEK4P51957 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
NEK4P51957 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NEK4P51957 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
NEK4P51957 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NEK4P51957 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.92■■□□□ 1.42
NEK4P51957 MIR6821-201ENST00000617625 74 ntBASIC23.92■■□□□ 1.42
NEK4P51957 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.92■■□□□ 1.42
NEK4P51957 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
NEK4P51957 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
NEK4P51957 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NEK4P51957 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.92■■□□□ 1.42
NEK4P51957 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.92■■□□□ 1.42
NEK4P51957 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.92■■□□□ 1.42
NEK4P51957 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
NEK4P51957 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NEK4P51957 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
NEK4P51957 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
NEK4P51957 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
NEK4P51957 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
NEK4P51957 AC116562.4-201ENST00000641316 2276 ntBASIC23.91■■□□□ 1.42
NEK4P51957 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
NEK4P51957 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NEK4P51957 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.91■■□□□ 1.42
NEK4P51957 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
NEK4P51957 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NEK4P51957 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.91■■□□□ 1.42
NEK4P51957 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NEK4P51957 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NEK4P51957 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NEK4P51957 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.91■■□□□ 1.42
NEK4P51957 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
NEK4P51957 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NEK4P51957 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.91■■□□□ 1.42
NEK4P51957 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
NEK4P51957 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms