Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.2■■□□□ 1.3
TM4SF4P48230 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TM4SF4P48230 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TM4SF4P48230 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.2■■□□□ 1.3
TM4SF4P48230 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.2■■□□□ 1.3
TM4SF4P48230 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC23.2■■□□□ 1.3
TM4SF4P48230 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TM4SF4P48230 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC23.2■■□□□ 1.3
TM4SF4P48230 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC23.2■■□□□ 1.3
TM4SF4P48230 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.2■■□□□ 1.3
TM4SF4P48230 B3GAT3P1-201ENST00000471720 806 ntBASIC23.2■■□□□ 1.3
TM4SF4P48230 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TM4SF4P48230 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.2■■□□□ 1.3
TM4SF4P48230 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.2■■□□□ 1.3
TM4SF4P48230 AL138966.2-201ENST00000621997 464 ntBASIC23.2■■□□□ 1.3
TM4SF4P48230 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.2■■□□□ 1.3
TM4SF4P48230 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TM4SF4P48230 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TM4SF4P48230 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TM4SF4P48230 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TM4SF4P48230 DUSP5P1-201ENST00000441325 1139 ntBASIC23.19■■□□□ 1.3
TM4SF4P48230 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TM4SF4P48230 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC23.19■■□□□ 1.3
TM4SF4P48230 AL445675.2-201ENST00000620291 557 ntBASIC23.19■■□□□ 1.3
TM4SF4P48230 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TM4SF4P48230 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TM4SF4P48230 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TM4SF4P48230 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TM4SF4P48230 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.18■■□□□ 1.3
TM4SF4P48230 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.18■■□□□ 1.3
TM4SF4P48230 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TM4SF4P48230 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TM4SF4P48230 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
TM4SF4P48230 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
TM4SF4P48230 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC23.18■■□□□ 1.3
TM4SF4P48230 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TM4SF4P48230 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.18■■□□□ 1.3
TM4SF4P48230 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC23.18■■□□□ 1.3
TM4SF4P48230 AC097488.1-201ENST00000507834 756 ntBASIC23.18■■□□□ 1.3
TM4SF4P48230 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC23.18■■□□□ 1.3
TM4SF4P48230 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
TM4SF4P48230 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.18■■□□□ 1.3
TM4SF4P48230 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC23.18■■□□□ 1.3
TM4SF4P48230 AC139887.4-201ENST00000607877 719 ntBASIC23.18■■□□□ 1.3
TM4SF4P48230 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC23.18■■□□□ 1.3
TM4SF4P48230 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
TM4SF4P48230 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TM4SF4P48230 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TM4SF4P48230 KRT8P36-201ENST00000489121 1440 ntBASIC23.17■■□□□ 1.3
TM4SF4P48230 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.17■■□□□ 1.3
TM4SF4P48230 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TM4SF4P48230 HMGA1P5-201ENST00000412453 271 ntBASIC23.17■■□□□ 1.3
TM4SF4P48230 TSPY5P-201ENST00000426936 936 ntBASIC23.17■■□□□ 1.3
TM4SF4P48230 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC23.17■■□□□ 1.3
TM4SF4P48230 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC23.17■■□□□ 1.3
TM4SF4P48230 AC011506.1-201ENST00000474329 610 ntBASIC23.17■■□□□ 1.3
TM4SF4P48230 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
TM4SF4P48230 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.17■■□□□ 1.3
TM4SF4P48230 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TM4SF4P48230 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC23.17■■□□□ 1.3
TM4SF4P48230 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
TM4SF4P48230 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
TM4SF4P48230 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TM4SF4P48230 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TM4SF4P48230 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TM4SF4P48230 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TM4SF4P48230 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TM4SF4P48230 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TM4SF4P48230 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.16■■□□□ 1.3
TM4SF4P48230 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TM4SF4P48230 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.16■■□□□ 1.3
TM4SF4P48230 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TM4SF4P48230 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23.16■■□□□ 1.3
TM4SF4P48230 AL450487.1-201ENST00000426799 995 ntBASIC23.16■■□□□ 1.3
TM4SF4P48230 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.16■■□□□ 1.3
TM4SF4P48230 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TM4SF4P48230 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
TM4SF4P48230 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC23.16■■□□□ 1.3
TM4SF4P48230 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TM4SF4P48230 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.15■■□□□ 1.3
TM4SF4P48230 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TM4SF4P48230 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TM4SF4P48230 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TM4SF4P48230 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TM4SF4P48230 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TM4SF4P48230 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TM4SF4P48230 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TM4SF4P48230 FAM86EP-206ENST00000510506 987 ntBASIC23.15■■□□□ 1.3
TM4SF4P48230 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.15■■□□□ 1.3
TM4SF4P48230 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TM4SF4P48230 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TM4SF4P48230 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TM4SF4P48230 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TM4SF4P48230 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.14■■□□□ 1.3
TM4SF4P48230 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.14■■□□□ 1.29
TM4SF4P48230 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TM4SF4P48230 IPPK-202ENST00000375522 882 ntTSL 3 BASIC23.14■■□□□ 1.29
TM4SF4P48230 PCED1CP-201ENST00000419887 785 ntBASIC23.14■■□□□ 1.29
TM4SF4P48230 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
TM4SF4P48230 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms