Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SLC6A12P48065 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A12P48065 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC6A12P48065 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A12P48065 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC6A12P48065 KRT8P17-201ENST00000453110 1448 ntBASIC19.45■□□□□ 0.7
SLC6A12P48065 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.45■□□□□ 0.7
SLC6A12P48065 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC6A12P48065 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC6A12P48065 AL031963.3-201ENST00000606441 850 ntBASIC19.45■□□□□ 0.7
SLC6A12P48065 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A12P48065 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SLC6A12P48065 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC6A12P48065 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SLC6A12P48065 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A12P48065 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A12P48065 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A12P48065 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A12P48065 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SLC6A12P48065 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC6A12P48065 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A12P48065 LSM12P1-201ENST00000411836 588 ntBASIC19.44■□□□□ 0.7
SLC6A12P48065 AC006970.2-201ENST00000450065 779 ntBASIC19.44■□□□□ 0.7
SLC6A12P48065 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.44■□□□□ 0.7
SLC6A12P48065 AL121832.2-201ENST00000610979 668 ntBASIC19.44■□□□□ 0.7
SLC6A12P48065 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A12P48065 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A12P48065 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A12P48065 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.44■□□□□ 0.7
SLC6A12P48065 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SLC6A12P48065 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A12P48065 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A12P48065 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC6A12P48065 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A12P48065 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
SLC6A12P48065 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A12P48065 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A12P48065 BX276092.2-201ENST00000417668 665 ntBASIC19.43■□□□□ 0.7
SLC6A12P48065 GUSBP6-202ENST00000438529 1198 ntBASIC19.43■□□□□ 0.7
SLC6A12P48065 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC6A12P48065 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC6A12P48065 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC6A12P48065 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A12P48065 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A12P48065 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A12P48065 AFG3L1P-217ENST00000557444 2447 ntBASIC19.43■□□□□ 0.7
SLC6A12P48065 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A12P48065 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A12P48065 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SLC6A12P48065 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A12P48065 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A12P48065 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SLC6A12P48065 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A12P48065 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A12P48065 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A12P48065 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A12P48065 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A12P48065 AC083906.2-201ENST00000511578 360 ntBASIC19.42■□□□□ 0.7
SLC6A12P48065 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A12P48065 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SLC6A12P48065 AC092666.2-201ENST00000613287 246 ntBASIC19.42■□□□□ 0.7
SLC6A12P48065 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A12P48065 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC6A12P48065 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A12P48065 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A12P48065 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A12P48065 KRT8P20-201ENST00000423953 1409 ntBASIC19.42■□□□□ 0.7
SLC6A12P48065 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SLC6A12P48065 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC6A12P48065 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SLC6A12P48065 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC6A12P48065 MIPEPP3-201ENST00000412105 444 ntBASIC19.41■□□□□ 0.7
SLC6A12P48065 NCF1B-203ENST00000435988 1254 ntBASIC19.41■□□□□ 0.7
SLC6A12P48065 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC6A12P48065 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC6A12P48065 AC023632.3-201ENST00000521633 145 ntBASIC19.41■□□□□ 0.7
SLC6A12P48065 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC6A12P48065 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC6A12P48065 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SLC6A12P48065 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC6A12P48065 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC6A12P48065 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A12P48065 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms