Protein–RNA interactions for Protein: P43554

SWP82, SWI/SNF global transcription activator complex subunit SWP82, yeastyeast

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWP82P43554 NAB6YML117W 3405 nt1.74□□□□□ -2.13
SWP82P43554 YMR242W-AYMR242W-A 90 nt1.74□□□□□ -2.13
SWP82P43554 YOL160WYOL160W 342 nt1.74□□□□□ -2.13
SWP82P43554 YJR039WYJR039W 3366 nt1.73□□□□□ -2.13
SWP82P43554 ALG13YGL047W 609 nt1.73□□□□□ -2.13
SWP82P43554 tT(UGU)HtT(UGU)H 72 nt1.73□□□□□ -2.13
SWP82P43554 TMA7YLR262C-A 195 nt1.73□□□□□ -2.13
SWP82P43554 OST1YJL002C 1431 nt1.73□□□□□ -2.13
SWP82P43554 PIG1YLR273C 1947 nt1.72□□□□□ -2.13
SWP82P43554 PUT3YKL015W 2940 nt1.72□□□□□ -2.13
SWP82P43554 GYP5YPL249C 2685 nt1.72□□□□□ -2.13
SWP82P43554 YDL211CYDL211C 1119 nt1.72□□□□□ -2.13
SWP82P43554 SFB2YNL049C 2631 nt1.72□□□□□ -2.13
SWP82P43554 TDA9YML081W 3756 nt1.72□□□□□ -2.13
SWP82P43554 LHS1YKL073W 2646 nt1.71□□□□□ -2.13
SWP82P43554 APL2YKL135C 2181 nt1.71□□□□□ -2.14
SWP82P43554 snR60snR60 104 nt1.71□□□□□ -2.14
SWP82P43554 YNL144CYNL144C 2223 nt1.71□□□□□ -2.14
SWP82P43554 HMRA2YCR096C 360 nt1.7□□□□□ -2.14
SWP82P43554 AI5_ALPHAQ0070 1893 nt1.7□□□□□ -2.14
SWP82P43554 YGR069WYGR069W 336 nt1.7□□□□□ -2.14
SWP82P43554 ENV11YGR071C 2583 nt1.69□□□□□ -2.14
SWP82P43554 SPT21YMR179W 2277 nt1.69□□□□□ -2.14
SWP82P43554 COG8YML071C 1824 nt1.69□□□□□ -2.14
SWP82P43554 PAU2YEL049W 363 nt1.69□□□□□ -2.14
SWP82P43554 MYO2YOR326W 4725 nt1.69□□□□□ -2.14
SWP82P43554 LCD1YDR499W 2244 nt1.68□□□□□ -2.14
SWP82P43554 YLR035C-AYLR035C-A 3468 nt1.68□□□□□ -2.14
SWP82P43554 MAD1YGL086W 2250 nt1.68□□□□□ -2.14
SWP82P43554 YDR182W-AYDR182W-A 204 nt1.68□□□□□ -2.14
SWP82P43554 YHR063W-AYHR063W-A 336 nt1.68□□□□□ -2.14
SWP82P43554 YMR247W-AYMR247W-A 144 nt1.68□□□□□ -2.14
SWP82P43554 SCW11YGL028C 1629 nt1.67□□□□□ -2.14
SWP82P43554 YJL015CYJL015C 285 nt1.67□□□□□ -2.14
SWP82P43554 YMR272W-BYMR272W-B 108 nt1.67□□□□□ -2.14
SWP82P43554 YOR008C-AYOR008C-A 225 nt1.67□□□□□ -2.14
SWP82P43554 RAD61YDR014W 1944 nt1.67□□□□□ -2.14
SWP82P43554 NIP100YPL174C 2607 nt1.67□□□□□ -2.14
SWP82P43554 SSS1YDR086C 243 nt1.66□□□□□ -2.14
SWP82P43554 RAD34YDR314C 2079 nt1.66□□□□□ -2.14
SWP82P43554 PEP1YBL017C 4740 nt1.66□□□□□ -2.14
SWP82P43554 NOC3YLR002C 1992 nt1.65□□□□□ -2.14
SWP82P43554 SEC5YDR166C 2916 nt1.65□□□□□ -2.14
SWP82P43554 YPL152W-AYPL152W-A 99 nt1.65□□□□□ -2.15
SWP82P43554 SPC98YNL126W 2541 nt1.65□□□□□ -2.15
SWP82P43554 snR8snR8 190 nt1.64□□□□□ -2.15
SWP82P43554 YIR044CYIR044C 186 nt1.64□□□□□ -2.15
SWP82P43554 YMR175W-AYMR175W-A 195 nt1.64□□□□□ -2.15
SWP82P43554 VIK1YPL253C 1944 nt1.64□□□□□ -2.15
SWP82P43554 YCK3YER123W 1575 nt1.64□□□□□ -2.15
SWP82P43554 HSL1YKL101W 4557 nt1.63□□□□□ -2.15
SWP82P43554 EMC5YIL027C 426 nt1.63□□□□□ -2.15
SWP82P43554 RPL34BYIL052C 366 nt1.63□□□□□ -2.15
SWP82P43554 YNL028WYNL028W 318 nt1.63□□□□□ -2.15
SWP82P43554 CUL3YGR003W 2235 nt1.63□□□□□ -2.15
SWP82P43554 YDR366CYDR366C 399 nt1.62□□□□□ -2.15
SWP82P43554 CSE2YNR010W 450 nt1.62□□□□□ -2.15
SWP82P43554 SPO24YPR036W-A 204 nt1.62□□□□□ -2.15
SWP82P43554 CTF4YPR135W 2784 nt1.61□□□□□ -2.15
SWP82P43554 RAD50YNL250W 3939 nt1.61□□□□□ -2.15
SWP82P43554 YPP1YGR198W 2454 nt1.61□□□□□ -2.15
SWP82P43554 SKI3YPR189W 4299 nt1.6□□□□□ -2.15
SWP82P43554 PTP2YOR208W 2253 nt1.6□□□□□ -2.15
SWP82P43554 MPT5YGL178W 2580 nt1.6□□□□□ -2.15
SWP82P43554 SLI15YBR156C 2097 nt1.6□□□□□ -2.15
SWP82P43554 PKH3YDR466W 2697 nt1.6□□□□□ -2.15
SWP82P43554 FAB1YFR019W 6837 nt1.59□□□□□ -2.15
SWP82P43554 YOR093CYOR093C 4947 nt1.58□□□□□ -2.16
SWP82P43554 YEL020C-BYEL020C-B 198 nt1.58□□□□□ -2.16
SWP82P43554 INA22YIR024C 651 nt1.58□□□□□ -2.16
SWP82P43554 UFD2YDL190C 2886 nt1.57□□□□□ -2.16
SWP82P43554 RPL31AYDL075W 342 nt1.57□□□□□ -2.16
SWP82P43554 YGL188C-AYGL188C-A 141 nt1.57□□□□□ -2.16
SWP82P43554 YMR321CYMR321C 318 nt1.57□□□□□ -2.16
SWP82P43554 YOR218CYOR218C 420 nt1.57□□□□□ -2.16
SWP82P43554 YBR174CYBR174C 315 nt1.57□□□□□ -2.16
SWP82P43554 snR49snR49 165 nt1.57□□□□□ -2.16
SWP82P43554 YLL007CYLL007C 1998 nt1.57□□□□□ -2.16
SWP82P43554 PKH2YOL100W 3246 nt1.57□□□□□ -2.16
SWP82P43554 YLL054CYLL054C 2532 nt1.57□□□□□ -2.16
SWP82P43554 KIP1YBL063W 3336 nt1.56□□□□□ -2.16
SWP82P43554 COG4YPR105C 2586 nt1.56□□□□□ -2.16
SWP82P43554 IRA1YBR140C 9279 nt1.55□□□□□ -2.16
SWP82P43554 SMC4YLR086W 4257 nt1.55□□□□□ -2.16
SWP82P43554 RPS27BYHR021C 249 nt1.55□□□□□ -2.16
SWP82P43554 COF1YLL050C 432 nt1.55□□□□□ -2.16
SWP82P43554 YOR376WYOR376W 369 nt1.55□□□□□ -2.16
SWP82P43554 VPS54YDR027C 2670 nt1.55□□□□□ -2.16
SWP82P43554 PDE2YOR360C 1581 nt1.55□□□□□ -2.16
SWP82P43554 TBS1YBR150C 3285 nt1.55□□□□□ -2.16
SWP82P43554 SAC3YDR159W 3906 nt1.54□□□□□ -2.16
SWP82P43554 PBY1YBR094W 2262 nt1.54□□□□□ -2.16
SWP82P43554 YGL217CYGL217C 342 nt1.54□□□□□ -2.16
SWP82P43554 YBL008W-AYBL008W-A 240 nt1.54□□□□□ -2.16
SWP82P43554 SLX4YLR135W 2247 nt1.54□□□□□ -2.16
SWP82P43554 AIM44YPL158C 2277 nt1.54□□□□□ -2.16
SWP82P43554 YJL022WYJL022W 309 nt1.53□□□□□ -2.16
SWP82P43554 YJL197C-AYJL197C-A 282 nt1.53□□□□□ -2.16
SWP82P43554 RPS25BYLR333C 327 nt1.53□□□□□ -2.16
SWP82P43554 YMR158W-BYMR158W-B 321 nt1.53□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 29.4 ms