Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
GDNFP39905 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDNFP39905 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDNFP39905 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GDNFP39905 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GDNFP39905 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDNFP39905 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.47■□□□□ 0.39
GDNFP39905 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDNFP39905 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDNFP39905 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDNFP39905 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GDNFP39905 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
GDNFP39905 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDNFP39905 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.47■□□□□ 0.39
GDNFP39905 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDNFP39905 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.46■□□□□ 0.39
GDNFP39905 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.46■□□□□ 0.39
GDNFP39905 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDNFP39905 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDNFP39905 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDNFP39905 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.46■□□□□ 0.39
GDNFP39905 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GDNFP39905 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDNFP39905 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.46■□□□□ 0.39
GDNFP39905 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GDNFP39905 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDNFP39905 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.46■□□□□ 0.39
GDNFP39905 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.46■□□□□ 0.39
GDNFP39905 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GDNFP39905 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.46■□□□□ 0.39
GDNFP39905 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDNFP39905 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
GDNFP39905 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDNFP39905 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.46■□□□□ 0.39
GDNFP39905 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.46■□□□□ 0.39
GDNFP39905 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
GDNFP39905 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.46■□□□□ 0.38
GDNFP39905 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.45■□□□□ 0.38
GDNFP39905 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.45■□□□□ 0.38
GDNFP39905 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.45■□□□□ 0.38
GDNFP39905 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GDNFP39905 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDNFP39905 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.45■□□□□ 0.38
GDNFP39905 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.45■□□□□ 0.38
GDNFP39905 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.44■□□□□ 0.38
GDNFP39905 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.44■□□□□ 0.38
GDNFP39905 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
GDNFP39905 AC026471.1-201ENST00000564629 3026 ntBASIC17.44■□□□□ 0.38
GDNFP39905 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
GDNFP39905 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.44■□□□□ 0.38
GDNFP39905 AC027612.3-201ENST00000413684 1047 ntBASIC17.44■□□□□ 0.38
GDNFP39905 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.44■□□□□ 0.38
GDNFP39905 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.44■□□□□ 0.38
GDNFP39905 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.44■□□□□ 0.38
GDNFP39905 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.44■□□□□ 0.38
GDNFP39905 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.44■□□□□ 0.38
GDNFP39905 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
GDNFP39905 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GDNFP39905 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GDNFP39905 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.44■□□□□ 0.38
GDNFP39905 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GDNFP39905 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
GDNFP39905 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.43■□□□□ 0.38
GDNFP39905 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
GDNFP39905 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.43■□□□□ 0.38
GDNFP39905 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.43■□□□□ 0.38
GDNFP39905 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.43■□□□□ 0.38
GDNFP39905 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.43■□□□□ 0.38
GDNFP39905 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GDNFP39905 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.43■□□□□ 0.38
GDNFP39905 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms