Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.15■□□□□ 0.98
PCK1P35558 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCK1P35558 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCK1P35558 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCK1P35558 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PCK1P35558 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCK1P35558 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
PCK1P35558 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.15■□□□□ 0.98
PCK1P35558 AC069236.1-201ENST00000604339 616 ntBASIC21.15■□□□□ 0.98
PCK1P35558 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.15■□□□□ 0.98
PCK1P35558 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCK1P35558 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCK1P35558 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.15■□□□□ 0.98
PCK1P35558 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCK1P35558 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCK1P35558 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCK1P35558 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCK1P35558 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCK1P35558 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
PCK1P35558 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
PCK1P35558 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCK1P35558 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
PCK1P35558 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.14■□□□□ 0.97
PCK1P35558 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.14■□□□□ 0.97
PCK1P35558 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.14■□□□□ 0.97
PCK1P35558 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCK1P35558 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCK1P35558 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCK1P35558 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.13■□□□□ 0.97
PCK1P35558 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCK1P35558 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCK1P35558 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.13■□□□□ 0.97
PCK1P35558 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PCK1P35558 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCK1P35558 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCK1P35558 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PCK1P35558 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.13■□□□□ 0.97
PCK1P35558 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCK1P35558 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCK1P35558 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.13■□□□□ 0.97
PCK1P35558 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.13■□□□□ 0.97
PCK1P35558 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.13■□□□□ 0.97
PCK1P35558 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.13■□□□□ 0.97
PCK1P35558 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCK1P35558 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCK1P35558 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PCK1P35558 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCK1P35558 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.13■□□□□ 0.97
PCK1P35558 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCK1P35558 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCK1P35558 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCK1P35558 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
PCK1P35558 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.12■□□□□ 0.97
PCK1P35558 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.12■□□□□ 0.97
PCK1P35558 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCK1P35558 AC099778.1-201ENST00000568593 1911 ntBASIC21.12■□□□□ 0.97
PCK1P35558 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCK1P35558 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCK1P35558 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.12■□□□□ 0.97
PCK1P35558 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.12■□□□□ 0.97
PCK1P35558 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.12■□□□□ 0.97
PCK1P35558 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.12■□□□□ 0.97
PCK1P35558 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCK1P35558 IKBKGP1-201ENST00000612193 1073 ntBASIC21.12■□□□□ 0.97
PCK1P35558 OR10C1-204ENST00000622521 1039 ntBASIC21.12■□□□□ 0.97
PCK1P35558 AC008694.1-202ENST00000636953 945 ntBASIC21.12■□□□□ 0.97
PCK1P35558 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCK1P35558 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.12■□□□□ 0.97
PCK1P35558 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCK1P35558 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.12■□□□□ 0.97
PCK1P35558 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCK1P35558 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCK1P35558 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCK1P35558 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.12■□□□□ 0.97
PCK1P35558 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCK1P35558 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCK1P35558 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PCK1P35558 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.11■□□□□ 0.97
PCK1P35558 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCK1P35558 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PCK1P35558 AC004911.1-201ENST00000416316 871 ntBASIC21.11■□□□□ 0.97
PCK1P35558 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCK1P35558 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.11■□□□□ 0.97
PCK1P35558 AC080038.1-201ENST00000611274 1154 ntBASIC21.11■□□□□ 0.97
PCK1P35558 SMG8-203ENST00000578922 2178 ntBASIC21.11■□□□□ 0.97
PCK1P35558 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCK1P35558 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCK1P35558 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCK1P35558 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCK1P35558 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.11■□□□□ 0.97
PCK1P35558 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCK1P35558 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.11■□□□□ 0.97
PCK1P35558 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PCK1P35558 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.11■□□□□ 0.97
PCK1P35558 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.1■□□□□ 0.97
PCK1P35558 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCK1P35558 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCK1P35558 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.1■□□□□ 0.97
PCK1P35558 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCK1P35558 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms