Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.13■□□□□ 0.65
RORAP35398 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.13■□□□□ 0.65
RORAP35398 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.13■□□□□ 0.65
RORAP35398 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RORAP35398 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RORAP35398 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RORAP35398 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
RORAP35398 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RORAP35398 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RORAP35398 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.13■□□□□ 0.65
RORAP35398 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RORAP35398 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.13■□□□□ 0.65
RORAP35398 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.13■□□□□ 0.65
RORAP35398 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RORAP35398 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RORAP35398 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
RORAP35398 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RORAP35398 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.12■□□□□ 0.65
RORAP35398 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RORAP35398 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RORAP35398 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.12■□□□□ 0.65
RORAP35398 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RORAP35398 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RORAP35398 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RORAP35398 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.12■□□□□ 0.65
RORAP35398 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.12■□□□□ 0.65
RORAP35398 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.12■□□□□ 0.65
RORAP35398 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RORAP35398 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RORAP35398 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RORAP35398 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.12■□□□□ 0.65
RORAP35398 MTDHP1-201ENST00000605323 784 ntBASIC19.12■□□□□ 0.65
RORAP35398 FAM197Y4-202ENST00000622692 608 ntBASIC19.12■□□□□ 0.65
RORAP35398 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RORAP35398 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RORAP35398 AL137060.1-201ENST00000618151 2648 ntBASIC19.12■□□□□ 0.65
RORAP35398 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RORAP35398 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RORAP35398 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RORAP35398 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RORAP35398 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RORAP35398 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RORAP35398 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.11■□□□□ 0.65
RORAP35398 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.11■□□□□ 0.65
RORAP35398 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.11■□□□□ 0.65
RORAP35398 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
RORAP35398 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RORAP35398 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.11■□□□□ 0.65
RORAP35398 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RORAP35398 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RORAP35398 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.11■□□□□ 0.65
RORAP35398 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RORAP35398 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RORAP35398 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RORAP35398 AL390719.1-204ENST00000412397 1219 ntBASIC19.11■□□□□ 0.65
RORAP35398 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.11■□□□□ 0.65
RORAP35398 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RORAP35398 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RORAP35398 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.11■□□□□ 0.65
RORAP35398 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RORAP35398 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.11■□□□□ 0.65
RORAP35398 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.11■□□□□ 0.65
RORAP35398 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.11■□□□□ 0.65
RORAP35398 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RORAP35398 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.1■□□□□ 0.65
RORAP35398 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
RORAP35398 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RORAP35398 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RORAP35398 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RORAP35398 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RORAP35398 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RORAP35398 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.1■□□□□ 0.65
RORAP35398 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RORAP35398 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RORAP35398 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
RORAP35398 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RORAP35398 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RORAP35398 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.1■□□□□ 0.65
RORAP35398 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RORAP35398 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.1■□□□□ 0.65
RORAP35398 AL596275.1-201ENST00000423464 877 ntBASIC19.1■□□□□ 0.65
RORAP35398 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.1■□□□□ 0.65
RORAP35398 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RORAP35398 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.1■□□□□ 0.65
RORAP35398 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.1■□□□□ 0.65
RORAP35398 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RORAP35398 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.1■□□□□ 0.65
RORAP35398 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RORAP35398 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RORAP35398 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RORAP35398 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.1■□□□□ 0.65
RORAP35398 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.1■□□□□ 0.65
RORAP35398 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RORAP35398 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.1■□□□□ 0.65
RORAP35398 PLK5-205ENST00000642079 1969 ntBASIC19.1■□□□□ 0.65
RORAP35398 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.09■□□□□ 0.65
RORAP35398 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RORAP35398 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RORAP35398 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
RORAP35398 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms