Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN7P35236 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.83■□□□□ 0.92
PTPN7P35236 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN7P35236 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN7P35236 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN7P35236 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN7P35236 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.82■□□□□ 0.92
PTPN7P35236 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN7P35236 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN7P35236 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN7P35236 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PTPN7P35236 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN7P35236 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN7P35236 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN7P35236 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN7P35236 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PTPN7P35236 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PTPN7P35236 AC026271.2-201ENST00000428091 497 ntBASIC20.82■□□□□ 0.92
PTPN7P35236 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PTPN7P35236 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.82■□□□□ 0.92
PTPN7P35236 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.82■□□□□ 0.92
PTPN7P35236 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN7P35236 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.82■□□□□ 0.92
PTPN7P35236 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.82■□□□□ 0.92
PTPN7P35236 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN7P35236 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PTPN7P35236 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.81■□□□□ 0.92
PTPN7P35236 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPN7P35236 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PTPN7P35236 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
PTPN7P35236 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
PTPN7P35236 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN7P35236 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.81■□□□□ 0.92
PTPN7P35236 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.81■□□□□ 0.92
PTPN7P35236 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN7P35236 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.81■□□□□ 0.92
PTPN7P35236 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
PTPN7P35236 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PTPN7P35236 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PTPN7P35236 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PTPN7P35236 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PTPN7P35236 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN7P35236 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN7P35236 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN7P35236 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPN7P35236 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN7P35236 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN7P35236 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PTPN7P35236 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PTPN7P35236 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPN7P35236 AC105020.6-201ENST00000621523 1217 ntBASIC20.8■□□□□ 0.92
PTPN7P35236 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPN7P35236 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPN7P35236 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN7P35236 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN7P35236 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN7P35236 AC007952.6-201ENST00000573168 2673 ntBASIC20.8■□□□□ 0.92
PTPN7P35236 AC003957.1-201ENST00000625108 2673 ntBASIC20.8■□□□□ 0.92
PTPN7P35236 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN7P35236 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN7P35236 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN7P35236 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN7P35236 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN7P35236 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN7P35236 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.79■□□□□ 0.92
PTPN7P35236 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
PTPN7P35236 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN7P35236 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PTPN7P35236 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN7P35236 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.79■□□□□ 0.92
PTPN7P35236 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.79■□□□□ 0.92
PTPN7P35236 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PTPN7P35236 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.79■□□□□ 0.92
PTPN7P35236 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.79■□□□□ 0.92
PTPN7P35236 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PTPN7P35236 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN7P35236 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN7P35236 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.79■□□□□ 0.92
PTPN7P35236 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.79■□□□□ 0.92
PTPN7P35236 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN7P35236 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PTPN7P35236 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN7P35236 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN7P35236 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN7P35236 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.78■□□□□ 0.92
PTPN7P35236 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN7P35236 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN7P35236 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN7P35236 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN7P35236 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN7P35236 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN7P35236 AC016769.1-201ENST00000409132 1010 ntBASIC20.78■□□□□ 0.92
PTPN7P35236 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.78■□□□□ 0.92
PTPN7P35236 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN7P35236 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PTPN7P35236 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.78■□□□□ 0.92
PTPN7P35236 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN7P35236 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
PTPN7P35236 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
PTPN7P35236 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms