Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CHRNA3P32297 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.18■□□□□ 0.98
CHRNA3P32297 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHRNA3P32297 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHRNA3P32297 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.18■□□□□ 0.98
CHRNA3P32297 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.18■□□□□ 0.98
CHRNA3P32297 AC245052.3-201ENST00000450182 901 ntBASIC21.18■□□□□ 0.98
CHRNA3P32297 AC083906.2-201ENST00000511578 360 ntBASIC21.18■□□□□ 0.98
CHRNA3P32297 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.18■□□□□ 0.98
CHRNA3P32297 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CHRNA3P32297 MIR2861-201ENST00000636310 90 ntBASIC21.18■□□□□ 0.98
CHRNA3P32297 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
CHRNA3P32297 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHRNA3P32297 AC068338.2-201ENST00000563278 1430 ntBASIC21.18■□□□□ 0.98
CHRNA3P32297 RBM17P2-201ENST00000616397 1405 ntBASIC21.18■□□□□ 0.98
CHRNA3P32297 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CHRNA3P32297 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHRNA3P32297 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CHRNA3P32297 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHRNA3P32297 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
CHRNA3P32297 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.17■□□□□ 0.98
CHRNA3P32297 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHRNA3P32297 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHRNA3P32297 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRNA3P32297 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.17■□□□□ 0.98
CHRNA3P32297 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRNA3P32297 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.17■□□□□ 0.98
CHRNA3P32297 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.17■□□□□ 0.98
CHRNA3P32297 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRNA3P32297 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRNA3P32297 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CHRNA3P32297 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CHRNA3P32297 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA3P32297 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA3P32297 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA3P32297 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.16■□□□□ 0.98
CHRNA3P32297 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.16■□□□□ 0.98
CHRNA3P32297 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CHRNA3P32297 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA3P32297 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA3P32297 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA3P32297 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.16■□□□□ 0.98
CHRNA3P32297 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA3P32297 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA3P32297 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA3P32297 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CHRNA3P32297 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA3P32297 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA3P32297 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA3P32297 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.16■□□□□ 0.98
CHRNA3P32297 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.16■□□□□ 0.98
CHRNA3P32297 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CHRNA3P32297 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.15■□□□□ 0.98
CHRNA3P32297 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA3P32297 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA3P32297 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.15■□□□□ 0.98
CHRNA3P32297 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA3P32297 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CHRNA3P32297 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA3P32297 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.15■□□□□ 0.98
CHRNA3P32297 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.15■□□□□ 0.98
CHRNA3P32297 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.15■□□□□ 0.98
CHRNA3P32297 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA3P32297 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA3P32297 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
CHRNA3P32297 AC243732.1-201ENST00000612648 864 ntBASIC21.15■□□□□ 0.98
CHRNA3P32297 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.15■□□□□ 0.98
CHRNA3P32297 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.15■□□□□ 0.98
CHRNA3P32297 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.15■□□□□ 0.98
CHRNA3P32297 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.15■□□□□ 0.98
CHRNA3P32297 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA3P32297 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA3P32297 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHRNA3P32297 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNA3P32297 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.14■□□□□ 0.97
CHRNA3P32297 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNA3P32297 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNA3P32297 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.14■□□□□ 0.97
CHRNA3P32297 AC133552.2-202ENST00000575694 574 ntBASIC21.14■□□□□ 0.97
CHRNA3P32297 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.14■□□□□ 0.97
CHRNA3P32297 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNA3P32297 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNA3P32297 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNA3P32297 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNA3P32297 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA3P32297 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA3P32297 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.13■□□□□ 0.97
CHRNA3P32297 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.13■□□□□ 0.97
CHRNA3P32297 SMG8-203ENST00000578922 2178 ntBASIC21.13■□□□□ 0.97
CHRNA3P32297 AC116050.2-201ENST00000612102 1779 ntBASIC21.13■□□□□ 0.97
CHRNA3P32297 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA3P32297 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA3P32297 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.13■□□□□ 0.97
CHRNA3P32297 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA3P32297 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CHRNA3P32297 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.13■□□□□ 0.97
CHRNA3P32297 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.13■□□□□ 0.97
CHRNA3P32297 CYP2T1P-201ENST00000432607 1285 ntBASIC21.13■□□□□ 0.97
CHRNA3P32297 AF201337.1-201ENST00000520239 748 ntBASIC21.13■□□□□ 0.97
CHRNA3P32297 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms