Protein–RNA interactions for Protein: P30281

CCND3, G1/S-specific cyclin-D3, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3P30281 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.56■■□□□ 1.2
CCND3P30281 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.56■■□□□ 1.2
CCND3P30281 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
CCND3P30281 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.56■■□□□ 1.2
CCND3P30281 MIR2861-201ENST00000636310 90 ntBASIC22.56■■□□□ 1.2
CCND3P30281 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCND3P30281 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CCND3P30281 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CCND3P30281 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCND3P30281 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.56■■□□□ 1.2
CCND3P30281 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.55■■□□□ 1.2
CCND3P30281 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCND3P30281 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCND3P30281 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CCND3P30281 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCND3P30281 AC242852.2-201ENST00000615738 1807 ntBASIC22.55■■□□□ 1.2
CCND3P30281 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCND3P30281 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.55■■□□□ 1.2
CCND3P30281 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.55■■□□□ 1.2
CCND3P30281 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CCND3P30281 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.55■■□□□ 1.2
CCND3P30281 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CCND3P30281 AC006011.2-201ENST00000621313 1158 ntBASIC22.55■■□□□ 1.2
CCND3P30281 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.55■■□□□ 1.2
CCND3P30281 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCND3P30281 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCND3P30281 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCND3P30281 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.55■■□□□ 1.2
CCND3P30281 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCND3P30281 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCND3P30281 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.55■■□□□ 1.2
CCND3P30281 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCND3P30281 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCND3P30281 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCND3P30281 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.54■■□□□ 1.2
CCND3P30281 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.54■■□□□ 1.2
CCND3P30281 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCND3P30281 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCND3P30281 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCND3P30281 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.54■■□□□ 1.2
CCND3P30281 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.54■■□□□ 1.2
CCND3P30281 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCND3P30281 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.54■■□□□ 1.2
CCND3P30281 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.54■■□□□ 1.2
CCND3P30281 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CCND3P30281 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.54■■□□□ 1.2
CCND3P30281 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CCND3P30281 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCND3P30281 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.54■■□□□ 1.2
CCND3P30281 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CCND3P30281 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCND3P30281 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCND3P30281 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCND3P30281 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCND3P30281 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.53■■□□□ 1.2
CCND3P30281 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.53■■□□□ 1.2
CCND3P30281 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.53■■□□□ 1.2
CCND3P30281 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCND3P30281 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CCND3P30281 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.53■■□□□ 1.2
CCND3P30281 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCND3P30281 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCND3P30281 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.52■■□□□ 1.2
CCND3P30281 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
CCND3P30281 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCND3P30281 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCND3P30281 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.52■■□□□ 1.2
CCND3P30281 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCND3P30281 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCND3P30281 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.52■■□□□ 1.2
CCND3P30281 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.52■■□□□ 1.2
CCND3P30281 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.52■■□□□ 1.2
CCND3P30281 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CCND3P30281 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CCND3P30281 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCND3P30281 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.52■■□□□ 1.2
CCND3P30281 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
CCND3P30281 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
CCND3P30281 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.51■■□□□ 1.19
CCND3P30281 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCND3P30281 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.51■■□□□ 1.19
CCND3P30281 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CCND3P30281 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.51■■□□□ 1.19
CCND3P30281 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCND3P30281 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CCND3P30281 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCND3P30281 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCND3P30281 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCND3P30281 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.5■■□□□ 1.19
CCND3P30281 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCND3P30281 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCND3P30281 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.5■■□□□ 1.19
CCND3P30281 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC22.5■■□□□ 1.19
CCND3P30281 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC22.5■■□□□ 1.19
CCND3P30281 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCND3P30281 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.5■■□□□ 1.19
CCND3P30281 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CCND3P30281 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.5■■□□□ 1.19
CCND3P30281 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCND3P30281 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms