Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
EPHA3P29320 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EPHA3P29320 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
EPHA3P29320 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHA3P29320 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHA3P29320 SUDS3P1-201ENST00000505831 966 ntBASIC19.55■□□□□ 0.72
EPHA3P29320 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.55■□□□□ 0.72
EPHA3P29320 AC093484.2-201ENST00000580996 2166 ntBASIC19.55■□□□□ 0.72
EPHA3P29320 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
EPHA3P29320 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EPHA3P29320 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHA3P29320 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHA3P29320 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EPHA3P29320 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
EPHA3P29320 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
EPHA3P29320 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.54■□□□□ 0.72
EPHA3P29320 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.54■□□□□ 0.72
EPHA3P29320 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.54■□□□□ 0.72
EPHA3P29320 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EPHA3P29320 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EPHA3P29320 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EPHA3P29320 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
EPHA3P29320 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
EPHA3P29320 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EPHA3P29320 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
EPHA3P29320 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EPHA3P29320 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.54■□□□□ 0.72
EPHA3P29320 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
EPHA3P29320 DUX4L2-201ENST00000561772 1275 ntBASIC19.54■□□□□ 0.72
EPHA3P29320 AC104187.1-201ENST00000607510 612 ntBASIC19.54■□□□□ 0.72
EPHA3P29320 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
EPHA3P29320 DUX4L6-201ENST00000626483 1275 ntBASIC19.54■□□□□ 0.72
EPHA3P29320 DUX4L1-201ENST00000627662 1275 ntBASIC19.54■□□□□ 0.72
EPHA3P29320 DUX4L8-201ENST00000629013 1275 ntBASIC19.54■□□□□ 0.72
EPHA3P29320 DUX4L3-201ENST00000630187 1275 ntBASIC19.54■□□□□ 0.72
EPHA3P29320 DUX4L7-201ENST00000630678 1275 ntBASIC19.54■□□□□ 0.72
EPHA3P29320 DUX4L5-201ENST00000630834 1275 ntBASIC19.54■□□□□ 0.72
EPHA3P29320 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.54■□□□□ 0.72
EPHA3P29320 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.54■□□□□ 0.72
EPHA3P29320 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.54■□□□□ 0.72
EPHA3P29320 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EPHA3P29320 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.53■□□□□ 0.72
EPHA3P29320 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EPHA3P29320 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EPHA3P29320 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
EPHA3P29320 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EPHA3P29320 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
EPHA3P29320 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EPHA3P29320 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.53■□□□□ 0.72
EPHA3P29320 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
EPHA3P29320 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.53■□□□□ 0.72
EPHA3P29320 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.53■□□□□ 0.72
EPHA3P29320 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.53■□□□□ 0.72
EPHA3P29320 AP001160.3-201ENST00000601484 763 ntBASIC19.53■□□□□ 0.72
EPHA3P29320 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.53■□□□□ 0.72
EPHA3P29320 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
EPHA3P29320 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.53■□□□□ 0.72
EPHA3P29320 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.53■□□□□ 0.72
EPHA3P29320 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
EPHA3P29320 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EPHA3P29320 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EPHA3P29320 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
EPHA3P29320 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
EPHA3P29320 TREX1-205ENST00000625293 1783 ntBASIC19.52■□□□□ 0.72
EPHA3P29320 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
EPHA3P29320 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EPHA3P29320 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
EPHA3P29320 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EPHA3P29320 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
EPHA3P29320 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EPHA3P29320 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EPHA3P29320 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EPHA3P29320 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
EPHA3P29320 AC091799.1-201ENST00000422823 811 ntBASIC19.52■□□□□ 0.72
EPHA3P29320 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.52■□□□□ 0.72
EPHA3P29320 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.52■□□□□ 0.72
EPHA3P29320 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.52■□□□□ 0.72
EPHA3P29320 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
EPHA3P29320 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EPHA3P29320 AC004408.2-201ENST00000623613 2777 ntBASIC19.52■□□□□ 0.72
EPHA3P29320 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.52■□□□□ 0.71
EPHA3P29320 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
EPHA3P29320 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
EPHA3P29320 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
EPHA3P29320 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
EPHA3P29320 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
EPHA3P29320 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
EPHA3P29320 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
EPHA3P29320 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.51■□□□□ 0.71
EPHA3P29320 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EPHA3P29320 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EPHA3P29320 TNXA-203ENST00000507684 2038 ntBASIC19.51■□□□□ 0.71
EPHA3P29320 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
EPHA3P29320 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EPHA3P29320 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EPHA3P29320 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
EPHA3P29320 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EPHA3P29320 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.51■□□□□ 0.71
EPHA3P29320 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.51■□□□□ 0.71
EPHA3P29320 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms