Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VCLP18206 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VCLP18206 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
VCLP18206 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
VCLP18206 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.17■□□□□ 0.82
VCLP18206 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.17■□□□□ 0.82
VCLP18206 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.17■□□□□ 0.82
VCLP18206 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VCLP18206 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.17■□□□□ 0.82
VCLP18206 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VCLP18206 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VCLP18206 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VCLP18206 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
VCLP18206 LSM12P1-201ENST00000411836 588 ntBASIC20.17■□□□□ 0.82
VCLP18206 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
VCLP18206 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.17■□□□□ 0.82
VCLP18206 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.17■□□□□ 0.82
VCLP18206 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.17■□□□□ 0.82
VCLP18206 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.17■□□□□ 0.82
VCLP18206 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.17■□□□□ 0.82
VCLP18206 AL020996.1-203ENST00000536896 2307 ntBASIC20.17■□□□□ 0.82
VCLP18206 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.17■□□□□ 0.82
VCLP18206 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VCLP18206 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.17■□□□□ 0.82
VCLP18206 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VCLP18206 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VCLP18206 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VCLP18206 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.17■□□□□ 0.82
VCLP18206 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.17■□□□□ 0.82
VCLP18206 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
VCLP18206 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
VCLP18206 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VCLP18206 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.16■□□□□ 0.82
VCLP18206 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.16■□□□□ 0.82
VCLP18206 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
VCLP18206 AL138781.1-201ENST00000566567 1274 ntBASIC20.16■□□□□ 0.82
VCLP18206 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.16■□□□□ 0.82
VCLP18206 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
VCLP18206 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.16■□□□□ 0.82
VCLP18206 CYP2T3P-201ENST00000601990 817 ntBASIC20.16■□□□□ 0.82
VCLP18206 AC092118.2-201ENST00000613495 667 ntBASIC20.16■□□□□ 0.82
VCLP18206 AL589743.5-201ENST00000616611 1050 ntBASIC20.16■□□□□ 0.82
VCLP18206 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.16■□□□□ 0.82
VCLP18206 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.16■□□□□ 0.82
VCLP18206 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.16■□□□□ 0.82
VCLP18206 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.16■□□□□ 0.82
VCLP18206 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VCLP18206 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
VCLP18206 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.16■□□□□ 0.82
VCLP18206 AC007225.1-201ENST00000566331 1836 ntBASIC20.16■□□□□ 0.82
VCLP18206 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
VCLP18206 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCLP18206 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCLP18206 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
VCLP18206 AC073210.2-201ENST00000430369 194 ntBASIC20.15■□□□□ 0.82
VCLP18206 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.15■□□□□ 0.82
VCLP18206 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.15■□□□□ 0.82
VCLP18206 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.15■□□□□ 0.82
VCLP18206 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCLP18206 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.15■□□□□ 0.82
VCLP18206 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
VCLP18206 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
VCLP18206 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VCLP18206 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
VCLP18206 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCLP18206 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VCLP18206 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCLP18206 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCLP18206 AFG3L1P-217ENST00000557444 2447 ntBASIC20.15■□□□□ 0.82
VCLP18206 AC087289.5-201ENST00000586076 3175 ntBASIC20.15■□□□□ 0.82
VCLP18206 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
VCLP18206 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCLP18206 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
VCLP18206 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCLP18206 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VCLP18206 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCLP18206 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.14■□□□□ 0.81
VCLP18206 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCLP18206 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
VCLP18206 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
VCLP18206 CYP21A1P-202ENST00000354927 1481 ntBASIC20.14■□□□□ 0.81
VCLP18206 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
VCLP18206 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCLP18206 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.14■□□□□ 0.81
VCLP18206 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.14■□□□□ 0.81
VCLP18206 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.14■□□□□ 0.81
VCLP18206 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCLP18206 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VCLP18206 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCLP18206 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.14■□□□□ 0.81
VCLP18206 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
VCLP18206 AC069152.1-201ENST00000438030 544 ntBASIC20.14■□□□□ 0.81
VCLP18206 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCLP18206 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCLP18206 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCLP18206 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VCLP18206 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VCLP18206 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
VCLP18206 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCLP18206 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms